Return to main results Retrieve Phyre Job Id

Job DescriptionO55033
Confidence99.69%DateWed Jul 10 14:08:43 BST 2013
Rank131Aligned Residues58
% Identity22%Templatec3nmzD_
PDB info PDB header:cell adhesion/cell cycleChain: D: PDB Molecule:rho guanine nucleotide exchange factor 4; PDBTitle: crytal structure of apc complexed with asef
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60...
Predicted Secondary structure 































Query SS confidence 

























































Query Sequence  IVIAKWDYTAQQDQELDIRKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVERKNSLK
Query Conservation   






 
   




  

 
 

   
 

      
  
 

 



      
Alig confidence 

























































Template Conservation     




 
    



  

 
 
       

 
   
  
 

  

 
     
Template Sequence  CAEALWDHVTMDDQELGFKAGDVIEVMDATNREWWWGRVADGEGWFPASFVRLRVNQD
Template Known Secondary structure  SS
B



TTB

B
TT


SSS
SS
GGG

S

Template Predicted Secondary structure 























Template SS confidence 

























































   198.200.........210.........220.........230.........240.........250.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D