Job Description O55033 Confidence 53.80% Date Wed Jul 10 14:08:43 BST 2013 Rank 340 Aligned Residues 137 % Identity 18% Template c3m1uB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase; PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution Resolution 1.75 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		L	V	K	G	S	R	V	T	V	M	E	K	C	S	D	G	.	W	W	R	G	S	F	N	G	Q	I	G	W	F	P	S	N	Y	V	L	E	E	A	D	E	A	A	A	E	A	P	S	F	L	S	L	R	R	G	T	A	L	S	N
Query Conservation																		.
Alig confidence																		.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	W	X	G	T	P	V	F	V	G	H	A	T	A	D	R	A	W	L	Y	V	E	T	A	F	A	A	G	W	X	P	A	A	D	V	A	R	V	D	D	A	F	X	T	R	Y	E	S	G	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T										T	T	S	S							S	S							G	G	G														S	S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																												.
Query SS confidence																		.	.	.	.																												.
Query Sequence		G	Q	G	A	R	V	L	H	V	V	Q	T	L	Y	P	F	.	.	.	.	S	S	V	T	E	E	E	L	S	F	E	K	G	E	T	M	E	V	I	E	K	P	E	N	D	P	E	.	W	W	K	C	K	N	A	R	G	Q	V	G
Query Conservation																		.	.	.	.																												.
Alig confidence		.	.	.	.	.	.	.										.	.	.	.																												.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	S	L	A	A	I	L	R	D	D	T	S	L	N	G	A	D	G	T	H	L	A	T	A	H	I	G	T	V	L	P	L	S	G	A	S	Q	V	G	R	T	V	L	V	P	V	R	A	P	E	G	H	A	V
Template Known Secondary structure		.	.	.	.	.	.	.							S	T	T						T	T	S								T	T										S	S											T	T	S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	P	K	N	Y	V	V	V	L	S	D	G	P	A	L	H	P	A	H	T	P	Q	I	S	Y	T	G	P	S	A	S	G	R	F	A	G	R	E	W	Y	Y	G	N	V	T
Query Conservation
Alig confidence								.	.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		V	V	P	V	L	L	.	.	.	.	.	T	S	G	E	A	A	Q	K	P	V	P	L	T	P	G	N	X	A	E	L	G	N	R	X	X	G	Q	P	Y	G	W	G	G	L	Y
Template Known Secondary structure								.	.	.	.	.		T	T	T				S	S																T	T		B	B		G	G	G	G	G
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		288	.	290	.	.	.						.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D