Job Description O55033 Confidence 99.70% Date Wed Jul 10 14:08:43 BST 2013 Rank 124 Aligned Residues 80 % Identity 24% Template c2xp1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:spt6; PDBTitle: structure of the tandem sh2 domains from antonospora locustae2 transcription elongation factor spt6 Resolution 2.20 Å

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		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		G	R	F	A	G	R	E	W	Y	Y	G	N	V	T	R	H	Q	A	E	C	A	L	N	E	R	G	V	E	G	D	F	L	I	R	D	S	E	S	S	P	S	D	F	S	V	S	L	K	A	S	G	R	N	.	K	H	F	K	V	Q
Query Conservation																																																							.
Alig confidence												.														.	.											.																	.
Template Conservation												.														.	.											.
Template Sequence		P	R	F	Y	K	H	P	L	F	K	.	N	F	N	V	T	E	S	E	N	Y	L	R	S	.	.	S	T	D	D	F	L	I	R	K	G	.	S	R	H	G	Y	C	V	L	V	I	K	F	A	S	D	V	F	V	H	M	K	I	E
Template Known Secondary structure			G	G	G	G	S	T	T			.														.	.	S	S									.	S	S	T	T										T	T
Template Predicted Secondary structure												.														.	.											.
Template SS confidence
		787	.	.	790	.	.	.	.	.	.		.	.	.	800	.	.	.	.	.	.	.	.	.			810	.	.	.	.	.	.	.	.	.		820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	D	S	V	Y	C	I	G	Q	R	R	F	H	S	M	D	E	L	V	E	H	Y	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	S	E	H	Y	T	C	S	N	K	H	F	E	D	I	D	E	V	I	S	V	Y	V	R
Template Known Secondary structure				S	S					T	T				S	S								T
Template Predicted Secondary structure
Template SS confidence
		843	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D