Job Description O55033 Confidence 99.92% Date Wed Jul 10 14:08:43 BST 2013 Rank 42 Aligned Residues 105 % Identity 26% Template c2lctA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	S	G	R	F	A	G	R	E	W	Y	Y	G	N	V	T	R	H	Q	A	E	C	A	L	N	E	R	G	V	E	G	D	F	L	I	R	D	S	E	S	S	P	S	D	F	S	V	S	L	K	A	S	G	R	N	K	H	F	K
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		G	H	M	Q	D	L	S	V	H	L	W	Y	A	G	P	M	E	R	A	G	A	E	S	I	L	A	N	R	.	S	D	G	T	F	L	V	R	Q	R	V	K	D	A	A	E	F	A	I	S	I	K	Y	N	V	E	V	K	H	I	K
Template Known Secondary structure				S	S		S	T	T	S	S	S				S													S	.		T	T	B								S	S	S		S								S	S	S
Template Predicted Secondary structure																														.
Template SS confidence
		661	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.		.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		V	Q	L	V	D	S	V	Y	C	I	G	Q	R	.	R	F	H	S	M	D	E	L	V	E	H	Y	K	K	A	P	I	F	T	S	E	H	G	E	K	L	Y	L	V	R	A	L	Q
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		I	M	T	A	E	G	L	Y	R	I	T	E	K	K	A	F	R	G	L	T	E	L	V	E	F	Y	Q	Q	N	S	L	K	D	C	F	K	S	L	D	T	T	L	Q	F	P	F	K
Template Known Secondary structure						T	T				S	S	S	S	S			S	S									T	T	S						S	S	S							B		S
Template Predicted Secondary structure
Template SS confidence
		720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D