Return to main results Retrieve Phyre Job Id

Job DescriptionO55033
Confidence99.59%DateWed Jul 10 14:08:43 BST 2013
Rank245Aligned Residues59
% Identity20%Templatec2lcsA_
PDB info PDB header:transferase, signaling proteinChain: A: PDB Molecule:nap1-binding protein 2; PDBTitle: yeast nbp2p sh3 domain in complex with a peptide from ste20p
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.... .....40.... .....50.........60...
Predicted Secondary structure 
















.




.









Query SS confidence 




























.









.


















Query Sequence  IVIAKWDYTAQQDQELDIRKNERLWLLDD. SKTWWRVRNA. ANRTGYVPSNYVERKNSLK
Query Conservation   






 
   




  

 
 

  . 
 

     . 
  
 

 



      
Alig confidence 




























.









.


















Template Conservation     

  
      


   

 
 

      

       
  
  
  

     
 
Template Sequence  RAVALYDFEPENDNELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQPEL
Template Known Secondary structure  SS
B

SSTTB

B
TT
TTT
TTSS
STT

SS
Template Predicted Secondary structure 



























Template SS confidence 



























































   3......10.........20.........30.........40.........50.........60..
 
   64
Predicted Secondary structure 
Query SS confidence 
Query Sequence  K
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  E
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   63
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D