Return to main results Retrieve Phyre Job Id

Job DescriptionO55033
Confidence100.00%DateWed Jul 10 14:08:43 BST 2013
Rank5Aligned Residues157
% Identity31%Templatec2ablA_
PDB info PDB header:transferaseChain: A: PDB Molecule:abl tyrosine kinase; PDBTitle: sh3-sh2 domain fragment of human bcr-abl tyrosine kinase
Resolution2.50 Å
Model Dimensions (Å)X:40.559 Y:55.071 Z:31.551

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230.........240.........250..
Predicted Secondary structure 





































Query SS confidence 



























































Query Sequence  GARVLHVVQTLYPFSSVTEEELSFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYV
Query Conservation           


 
 
    


   

 
 
         
       
  
  
  

Alig confidence 


































..






















Template Conservation           
   
      

 
  

   
   ..    

         
  
  

Template Sequence  SENDPNLFVALYDFVASGDNTLSITKGEKLRVLGY. . NHNGEWCEAQTKNGQGWVPSNYI
Template Known Secondary structure 
TT
TTSS
B

SSSSB

B
TT
..
TTSSTTGGG
Template Predicted Secondary structure 





















..









Template SS confidence 



























































   78.80.........90.........100.........110.. .......120.........130.....
 
   253......260.........270.........280.........290.........300.........310..
Predicted Secondary structure 











































Query SS confidence 



























































Query Sequence  VVLSDGPALHPAHTPQISYTGPSASGRFAGREWYYGNVTRHQAECALNERGVEGDFLIRD
Query Conservation                       
          
  
   
  
   
      
 



 
Alig confidence 


......................
























.








Template Conservation     ...................... 


   

 
 
 
 


 

   .  





 
Template Sequence  TPV. . . . . . . . . . . . . . . . . . . . . . NSLEKHSWYHGPVSRNAAEYLLSSG. INGSFLVRE
Template Known Secondary structure  S......................S
GGGSTT

TSS
.
TT
Template Predicted Secondary structure 


......................















.



Template SS confidence 



























































   136.. .140.........150.........160... ......170..
 
   313......320.........330........ .340....... ..350.........360.........370
Predicted Secondary structure 









.



.









Query SS confidence 

























.








.






















Query Sequence  SESSPSDFSVSLKASGRNKHFKVQLV. DSVYCIGQR. RFHSMDELVEHYKKAPIFTSEHG
Query Conservation 
        

        
  
   .         . 
 
   

  
   

      
Alig confidence 

























.








.
















.....
Template Conservation 
        

        
  
               
 

  

  
     ..... 
Template Sequence  SESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVAD. . . . . G
Template Known Secondary structure 
SS
TT
TT
TTS
SSSS
SS

T.....T
Template Predicted Secondary structure 























.....
Template SS confidence 



























































   173......180.........190.........200.........210.........220...... .
 
   371........
Predicted Secondary structure 



Query SS confidence 








Query Sequence  EKLYLVRAL
Query Conservation      
  
 
Alig confidence 








Template Conservation 
   
  
 
Template Sequence  LITTLHYPA
Template Known Secondary structure  SSS





Template Predicted Secondary structure 








Template SS confidence 








   228.230......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D