Job Description O55033 Confidence 100.00% Date Wed Jul 10 14:08:43 BST 2013 Rank 11 Aligned Residues 152 % Identity 34% Template c1g83A_ PDB info PDB header:transferase Chain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase fyn; PDBTitle: crystal structure of fyn sh3-sh2 Resolution 2.60 Å Model Dimensions (Å) X:37.518 Y:59.727 Z:35.991

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	Q	T	L	Y	P	F	S	S	V	T	E	E	E	L	S	F	E	K	G	E	T	M	E	V	I	E	K	P	E	N	D	P	E	W	W	K	C	K	N	A	R	G	Q	V	G	L	V	P	K	N	Y	V	V	V	L	S	D	G
Query Conservation
Alig confidence																															.																														.
Template Conservation																															.																														.
Template Sequence		L	F	V	A	L	Y	D	Y	E	A	R	T	E	D	D	L	S	F	H	K	G	E	K	F	Q	I	L	N	S	.	S	E	G	D	W	W	E	A	R	S	L	T	T	G	E	T	G	Y	I	P	S	N	Y	V	A	P	V	D	S	.
Template Known Secondary structure						S	S		B				S	S	S	B			B		T	T									.		S	S	S							T	T	T								G	G	G				T	T	S	.
Template Predicted Secondary structure																															.																														.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		P	A	L	H	P	A	H	T	P	Q	I	S	Y	T	G	P	S	A	S	G	R	F	A	G	R	E	W	Y	Y	G	N	V	T	R	H	Q	A	E	C	A	L	N	E	R	G	.	V	E	G	D	F	L	I	R	D	S	E	S	S	P
Query Conservation																																															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	A	E	E	W	Y	F	G	K	L	G	R	K	D	A	E	R	Q	L	L	S	F	G	N	P	R	G	T	F	L	I	R	E	S	E	T	T	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	S	S	S	B		T	T												S	T	T			T	T								S	S	S	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		318	.	320	.	.	.	.	.	.						.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure											.	.	.	.	.													.										.
Query SS confidence											.	.	.	.	.													.										.
Query Sequence		S	D	F	S	V	S	L	K	A	.	.	.	.	.	S	G	R	N	K	H	F	K	V	Q	L	V	.	D	S	V	Y	C	I	G	Q	R	.	R	F	H	S	M	D	E	L	V	E	H	Y	K	K	A	P	I	F	T	S	E	H	G
Query Conservation											.	.	.	.	.													.										.
Alig confidence											.	.	.	.	.													.										.																		.	.	.	.	.
Template Conservation																																																								.	.	.	.	.
Template Sequence		G	A	Y	S	L	S	I	R	D	W	D	D	M	K	G	D	H	V	K	H	Y	K	I	R	K	L	D	N	G	G	Y	Y	I	T	T	R	A	Q	F	E	T	L	Q	Q	L	V	Q	H	Y	S	E	R	A	A	.	.	.	.	.	G
Template Known Secondary structure		T											S	S	S													T	T	S					T	T	T				S	S													T	.	.	.	.	.	T
Template Predicted Secondary structure																																																								.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.
		371	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	L	Y	L	V	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	S	R	L	V	V	P
Template Known Secondary structure		S	S	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D