Job Description P05480 Confidence 100.00% Date Tue Jul 30 13:01:21 BST 2013 Rank 269 Aligned Residues 236 % Identity 28% Template c3zduA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cyclin-dependent kinase-like 3; PDBTitle: crystal structure of the human cdkl3 kinase domain Resolution 2.20 Å

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		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		E	S	L	R	L	E	V	K	L	G	Q	G	C	F	G	E	V	W	M	G	T	W	N	G	T	T	R	.	V	A	I	K	T	L	K	P	G	T	M	S	P	E	A	F	L	Q	E	A	Q	V	M	K	K	L	R	H	E	K	L	V
Query Conservation																													.
Alig confidence																													.									.	.	.	.	.
Template Conservation																																						.	.	.	.	.
Template Sequence		E	M	Y	E	T	L	G	K	V	G	E	G	S	Y	G	T	V	M	K	C	K	H	K	N	T	G	Q	I	V	A	I	K	I	F	Y	N	.	.	.	.	.	K	I	A	M	R	E	I	K	F	L	K	Q	F	H	H	E	N	L	V
Template Known Secondary structure														T	T									T	T	T												.	.	.	.	.																T	T	B
Template Predicted Secondary structure																																						.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		332	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		Q	L	Y	A	V	V	S	E	.	E	P	I	Y	I	V	T	E	Y	M	N	K	G	S	L	L	D	F	L	K	G	E	T	G	K	Y	L	R	L	P	Q	L	V	D	M	S	A	Q	I	A	S	G	M	A	Y	V	E	R	M	N	Y
Query Conservation										.
Alig confidence										.																								.	.
Template Conservation																																		.	.
Template Sequence		N	L	I	E	V	F	R	Q	K	K	K	I	H	L	V	F	E	F	I	D	H	T	V	L	D	E	L	Q	H	Y	C	H	.	.	G	L	E	S	K	R	L	R	K	Y	L	F	Q	I	L	R	A	I	D	Y	L	H	S	N	N	I
Template Known Secondary structure										S	S	S									S										S	T	T	.	.	S																							T	T
Template Predicted Secondary structure																																		.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		V	H	R	D	L	R	A	A	N	I	L	V	G	E	N	L	V	C	K	V	A	D	F	G	L	A	R	L	I	E	D	N	E	Y	T	A	R	Q	G	A	K	F	P	I	K	W	T	A	P	E	A	A	L	Y	G	.	R	F	T	I
Query Conservation																																																									.
Alig confidence																																						.	.	.	.	.	.														.
Template Conservation																																						.	.	.	.	.	.
Template Sequence		I	H	R	D	I	K	P	E	N	I	L	V	S	Q	S	G	I	T	K	L	C	D	F	G	F	A	R	T	D	I	Y	D	D	E	V	A	.	.	.	.	.	.	T	R	W	Y	R	A	P	E	L	V	L	K	D	T	S	Y	G	K
Template Known Secondary structure		B					S	G	G	G					T	T									S	S		B										.	.	.	.	.	.			T	T							T	T		S				T
Template Predicted Secondary structure																																						.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	D	V	W	S	F	G	I	L	L	T	E	L	T	T	K	G	R	V	P	Y	P	G	M	V	N	R	E	V	L	D	Q	V	E	R	G	Y	R	M	P	C	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		P	V	D	I	W	A	L	G	C	M	I	I	E	M	A	T	.	G	N	P	Y	L	P	S	S	S	D	L	D	L	L	H	K	I	V	L	K	V	G	N	L	S	P	H	L	Q	N	I	F	S	K	S	P	I	F	A	G	V	V	L
Template Known Secondary structure																		.	S	S		S	S			S	S												T															G	G	G	T	T
Template Predicted Secondary structure																		.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
																494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	C	P	E	S	L	H	D	L	M	C	Q	C	W	R	K	E	P	E	E	R	P	T	F	E	Y	L	Q	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	Q	V	Q	H	P	K	N	A	R	K	K	Y	P	K	L	N	G	L	L	A	D	I	V	H	A	C	L	Q	I	D	P	A	D	R	I	S	S	S	D	L	L	H
Template Known Secondary structure								S	S					S	T	T	S														S	S	G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D