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Job DescriptionP05480
Confidence100.00%DateTue Jul 30 13:01:21 BST 2013
Rank316Aligned Residues259
% Identity28%Templatec3tl8H_
PDB info PDB header:transferase/ligaseChain: H: PDB Molecule:brassinosteroid insensitive 1-associated receptor kinase 1; PDBTitle: the avrptob-bak1 complex reveals two structurally similar2 kinaseinteracting domains in a single type iii effector
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290.........300.........310. ........320.
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Query Sequence  LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS. PEAFLQEAQV
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Template Sequence  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERQGGELQFQTEVEM
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TTTT
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   277..280.........290.........300.........310.........320.........330......
 
   322.......330......... 340.........350.........360... ......370........
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Query Sequence  MKKLRHEKLVQLYAVVSE. EPIYIVTEYMNKGSLLDFLKGETG. . KYLRLPQLVDMSAQI
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Template Sequence  ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS
Template Known Secondary structure  TTT


TTB




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   338.340.........350.........360.........370.........380.........390.......
 
   379380...... ...390.........400.........410.........420.........430.....
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Query Sequence  ASGMAYVE. . . RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK
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Template Sequence  ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD. . . HVAVRGTIG
Template Known Secondary structure  SSSS



SGGG
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   398.400.........410.........420.........430.........440..... ....450....
 
   436...440.........450.........460.........470........
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Query Sequence  WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE. . . . . . . . . . . . . . . . .
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Template Sequence  HIAPEYLSTGKSSEKTDVFGYGVMLLELIT. GQRAFDLARLANDDDVMLLDWVKGLLKEK
Template Known Secondary structure  SS
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T.SS
TTTS
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   458.460.........470.........480....... ..490.........500.........510......
 
   479480.........490.........500.........510.........520.....
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Query Sequence  . VLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE
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Template Sequence  KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE
Template Known Secondary structure 
GGGTS
GGGTT
S
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   517..520.........530.........540.........550.........560....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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