Job Description P05480 Confidence 100.00% Date Tue Jul 30 13:01:21 BST 2013 Rank 72 Aligned Residues 256 % Identity 25% Template c3fbvL_ PDB info PDB header:transferase, hydrolase Chain: L: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the oligomer formed by the kinase-ribonuclease2 domain of ire1 Resolution 3.20 Å

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		279	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure												.																																						.
Query SS confidence												.																																						.
Query Sequence		V	K	L	G	Q	G	C	F	G	E	.	V	W	M	G	T	W	N	G	T	T	R	V	A	I	K	T	L	K	P	G	T	M	S	P	E	A	F	L	Q	E	A	Q	V	M	K	K	L	.	R	H	E	K	L	V	Q	L	Y	A	V
Query Conservation												.																																						.
Alig confidence												.							.												.	.																		.
Template Conservation																			.												.	.
Template Sequence		K	I	L	G	Y	G	S	S	G	T	V	V	F	Q	G	S	F	.	Q	G	R	P	V	A	V	K	R	M	L	.	.	I	D	F	C	D	I	A	L	M	E	I	K	L	L	T	E	S	D	D	H	P	N	V	I	R	Y	Y	C	S
Template Known Secondary structure								T	T	T								S	.	S	S										.	.	G	G	G															T	T	S	T	T	B
Template Predicted Secondary structure																			.												.	.
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.		.	.	.	.	.	700	.	.	.	.	.			.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
		337	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370						.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure							.																														.	.	.	.	.
Query SS confidence							.																														.	.	.	.	.
Query Sequence		V	S	E	E	P	.	I	Y	I	V	T	E	Y	M	N	K	G	S	L	L	D	F	L	K	G	E	T	G	K	Y	L	R	L	P	Q	.	.	.	.	.	L	V	D	M	S	A	Q	I	A	S	G	M	A	Y	V	E	R	M	N	Y
Query Conservation							.																														.	.	.	.	.
Alig confidence							.										.																				.	.	.	.	.
Template Conservation																	.
Template Sequence		E	T	T	D	R	F	L	Y	I	A	L	E	L	C	N	.	L	N	L	Q	D	L	V	E	S	K	N	V	S	D	E	N	L	K	L	Q	K	E	Y	N	P	I	S	L	L	R	Q	I	A	S	G	V	A	H	L	H	S	L	K	I
Template Known Secondary structure					T	T										S	.								T			S		S	T	T						S	S																				T	T
Template Predicted Secondary structure																	.
Template SS confidence
		735	.	.	.	.	740	.	.	.	.	.	.	.	.	.		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.														.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	R	D	L	R	A	A	N	I	L	V	G	E	N	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	C	K	V	A	D	F	G	L	A	R	L	I	E	D	N	E	Y	T	A	R	Q	G	A	K	F	P	I	K	W	T
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	H	R	D	L	K	P	Q	N	I	L	V	S	T	S	S	R	F	T	A	D	Q	Q	T	G	A	E	N	L	R	I	L	I	S	D	F	G	L	C	K	K	L	D	S	G	Q	F	R	N	L	N	N	P	S	G	T	S	G	W	R
Template Known Secondary structure							S	T	T	T											S			S	S		S							B				S	S					T	T	T									S	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		794	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.
		438	.	440	.	.	.	.				.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.							.
Predicted Secondary structure									.	.	.																																												.	.	.	.	.	.
Query SS confidence									.	.	.																																												.	.	.	.	.	.
Query Sequence		A	P	E	A	A	L	Y	.	.	.	G	R	F	T	I	K	S	D	V	W	S	F	G	I	L	L	T	E	L	T	T	K	G	R	V	P	Y	P	G	M	V	N	R	E	V	L	D	Q	V	E	R	G	Y	.	.	.	.	.	.	R
Query Conservation									.	.	.																																												.	.	.	.	.	.
Alig confidence									.	.	.																													.	.														.	.	.	.	.	.
Template Conservation																																								.	.
Template Sequence		A	P	E	L	L	E	E	S	T	K	R	R	L	T	R	S	I	D	I	F	S	M	G	C	V	F	Y	Y	I	L	S	K	G	K	H	P	F	G	.	.	D	K	Y	S	R	E	S	N	I	I	R	G	I	F	S	L	D	E	M	K
Template Known Secondary structure							S	T	T	T						T																T	T	S			T	T		.	.	S											T								T
Template Predicted Secondary structure																																								.	.
Template SS confidence
		857	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.			.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.													.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	C	P	P	E	C	P	E	S	L	H	D	L	M	C	Q	C	W	R	K	E	P	E	E	R	P	T	F	E	Y	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	A	F	L	E	D	Y	F	T	S	T	E	P	Q	Y	Q
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	L	H	D	R	S	L	I	A	E	A	T	D	L	I	S	Q	M	I	D	H	D	P	L	K	R	P	T	A	M	K	V	L	R	H	P	L	F	W	P	K	S	K	K	L	E	F	L	L	K	V	S	D	R	L	E	I	E	N	R
Template Known Secondary structure		T																		T		S	S	T	T	T	S								T	S	G	G	G	S																	T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		943	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.
		537	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	P	S
Template Known Secondary structure		T	T	B
Template Predicted Secondary structure
Template SS confidence
		1003	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D