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Job DescriptionP05480
Confidence99.96%DateTue Jul 30 13:01:21 BST 2013
Rank324Aligned Residues184
% Identity17%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   278.280.........290.........300.........310.... .....320........
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Query Sequence  EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA. . . . . . . . . FLQEAQVMKKLRHE
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Template Sequence  VEVNWIGAEADIKRDSY. LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDF
Template Known Secondary structure  S






S.TT


TTS
GGGT
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   319320.........330..... ....340.........350.........360.........370.......
 
   329330......... 340.........350.........360.........370.........380.......
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Query Sequence  KLVQLYAVVSE. EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER
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Template Sequence  GIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDN. . . . . . . . . . LDIAYKIGEIVGKLHK
Template Known Secondary structure  T




TTTT


SGGGTTTT
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   395....400.........410.........420........ .430.........440....
 
   388.390.........400.........410.........420.........430.........440.......
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Query Sequence  MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF
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Template Sequence  NDVIHNDLTTSNFIFDKD. . LYIIDFGLGKISNLDEDKAVDL. . . . . . IVFKKAVLSTHH
Template Known Secondary structure  TT
S


GGGSSS..


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   445....450.........460.. .......470.........480.... .....490......
 
   448.450.........460.........470.........480.....
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Query Sequence  TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER
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Template Sequence  EKFDEIWERFLEGYKSVY. DRWE. . . . IILELMKDVER
Template Known Secondary structure  TT
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   497..500.........510.... .... .520.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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