Return to main results Retrieve Phyre Job Id

Job DescriptionP05480
Confidence99.78%DateTue Jul 30 13:01:21 BST 2013
Rank329Aligned Residues132
% Identity19%Templatec3ek7A_
PDB info PDB header:fluorescent proteinChain: A: PDB Molecule:myosin light chain kinase, green fluorescent protein, PDBTitle: calcium-saturated gcamp2 dimer
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   386...390.........400.. ....... 410.........420.........430....
Predicted Secondary structure 












...






........
















Query SS confidence 
















. . .






. . . . . . . .
























Query Sequence  ERMNYVHRDLRAANILV. . . GENLVCK. . . . . . . . VADFGLARLIEDNEYTARQGAKFPI
Query Conservation 
   
 
 


  


 ...       ........
 



                   
Alig confidence 
















...






........













..








Template Conservation 
   
 




 

            
          
 
         ..      
  
Template Sequence  HAVRAIGRLSSLENVYIMADKQKNGIKANFKIRHNIEDGGVQLAYHYQQ. . NTPIGDGPV
Template Known Secondary structure 



GGGTBTTS
..SSSS

Template Predicted Secondary structure 



































..






Template SS confidence 



























































   4950.........60.........70.........80.........90....... ..100......
 
   435....440.........450.. .......460.. .......470........
Predicted Secondary structure  ......






..........









Query SS confidence  . . . . . .

















. . . . . . .









. . .















Query Sequence  . . . . . . KWTAPEAALYGRFTIKSD. . . . . . . VWSFGILLTE. . . LTTKGRVPYPGMVNRE
Query Conservation  ......   


           
.......
 
 
  
 
...
 
 
  
        
Alig confidence  ......






.









.......









...


.











Template Conservation        

 



.
   
  
 
       


 




    

 .
  

       
Template Sequence  LLPDNHYLSTQSK. LSKDPNEKRDHMVLLEFVTAAGITLSKGEELFT. GVVPILVELDGD
Template Known Secondary structure 



S.

TT

SS
S


TTS.S
Template Predicted Secondary structure 








.





















.











Template SS confidence 



























































   107..110......... 120.........130.........140.........150.. .......160....
 
   479 480..... ....490.........500.........510.........520.
Predicted Secondary structure  .
...

















Query SS confidence 
.





. . .



































Query Sequence  V. LDQVER. . . GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQ
Query Conservation   .   
  ...      
   
     

  
    
  

    
 
Alig confidence 
.





...



































Template Conservation 
    
           
  

  

 

  

   
  
 

 


Template Sequence  VNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLVQCF
Template Known Secondary structure  TTTTTTTTSS
SS
GGGGTTT

GGG
Template Predicted Secondary structure 
























Template SS confidence 














































   180.........190.........200.........210.........220......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D