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Job DescriptionP05480
Confidence100.00%DateTue Jul 30 13:01:21 BST 2013
Rank217Aligned Residues224
% Identity25%Templatec3efwA_
PDB info PDB header:transferase/inhibitorChain: A: PDB Molecule:serine/threonine-protein kinase 6; PDBTitle: structure of auroraa with pyridyl-pyrimidine urea inhibitor
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   269270.........280.........290......... 300...... ...310.........320...
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Query Sequence  EIPRESLRLEVKLGQGCFGEVWMGTWNGTTR. VAIKTLK. . . . PGTMSPEAFLQEAQVMK
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Template Sequence  QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS
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GGGTTTTT

T
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   127..130.........140.........150.........160.........170.........180......
 
   324.....330.........340. ........350.........360.........370.........380..
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Query Sequence  KLRHEKLVQLYAVVSEEP. IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM
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Template Sequence  HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS. . KFDEQRTATYITELANAL
Template Known Secondary structure  T


TTB


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   187..190.........200.........210.........220...... ...230.........240....
 
   383......390.........400.........410.........420.........430.........440..
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Query Sequence  AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA
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Template Sequence  SYCHSKRVIHRDIKPENLLLGSAGELKIADFL. . . . . . . . . . . . . . . . . . . . DYLPPE. .
Template Known Secondary structure  TTT






GGG
TTS




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GG..
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   245....250.........260.........270...... ...280..
 
   443......450.........460.........470.........480.........490.........500..
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Query Sequence  LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL
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Template Sequence  . . . . MIEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRV. EFTFPDFVTEGARDL
Template Known Secondary structure  ....GT

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TT

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   300.........310........ .320.........330........ .340.........350...
 
   503......510.........520..
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Query Sequence  MCQCWRKEPEERPTFEYLQA
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Template Sequence  ISRLLKHNPSQRPMLREVLE
Template Known Secondary structure  S
SSGGGS

T
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   360.........370.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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