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Job DescriptionP05480
Confidence100.00%DateTue Jul 30 13:01:21 BST 2013
Rank136Aligned Residues239
% Identity35%Templatec3dtcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 9; PDBTitle: crystal structure of mixed-lineage kinase mlk1 complexed2 with compound 16
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   268.270.........280.........290.........300.........310.........320.......
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Query Sequence  WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH
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Template Sequence  LEIDFAELTLEEIIGIGGFGKVYRAFW. IGDEVAVKAAT. . . . . IENVRQEAKLFAMLKH
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   137..140.........150.........160... ......170.... .....180.........190
 
   328.330.........340.........350.........360.........370.........380.......
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Query Sequence  EKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER
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Template Sequence  PNIIALRGVCLKEL. CLVMEFARGGPLNRVL. . . SGKRIPPDILVNWAVQIARGMNYLHD
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   201........210.... .....220.........230 .........240.........250......
 
   388. 390.........400.........410.........420.........430.........440....
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Query Sequence  MN. . . YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY
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Template Sequence  EAIVPIIHRDLKSSNILILQKVENGDLSNKILKI. . . . . . . . TDFGLGAYAWMAPEVIRA
Template Known Secondary structure  SSSS



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SGGGSS

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   259260.........270.........280.........290.. .......300.........310
 
   445....450.........460.........470.........480....... ..490.........500...
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Query Sequence  GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY. RMPCPPECPESLHDLM
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Template Sequence  SMFSKGSDVWSYGVLLWELLT. GEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLM
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TTTTS
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   324.....330.........340.... .....350.........360.........370.........380..
 
   504.....510.........520.....
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Query Sequence  CQCWRKEPEERPTFEYLQAFLE
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Template Sequence  EDCWNPDPHSRPSFTNILDQLT
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   383......390.........400....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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