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Job DescriptionP05480
Confidence100.00%DateTue Jul 30 13:01:21 BST 2013
Rank232Aligned Residues238
% Identity26%Templatec2y4iC_
PDB info PDB header:transferaseChain: C: PDB Molecule:dual specificity mitogen-activated protein kinase kinase PDBTitle: ksr2-mek1 heterodimer
Resolution3.46 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   279280.........290......... 300.........310. ........320.........330.....
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Query Sequence  VKLGQGCFGEVWMGTWNGTTR. VAIKTLKPGTMS. . PEAFLQEAQVMKKLRHEKLVQLYA
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Template Sequence  EKISELGAGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG
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   6970.........80.........90.........100.........110.........120........
 
   336...340. ........350.........360.........370.........380...... ...390...
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Query Sequence  VVSEEP. IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE. RMNYVHR
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Template Sequence  AFYSDGEISICMEHMDGGSLDQVLKKAG. . RIPEQILGKVSIAVIKGLTYLREKHKIMHR
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   132.......140.........150......... 160.........170.........180.........
 
   394.....400.........410.........420.........430.........440.........450...
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Query Sequence  DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV
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Template Sequence  DVKPSNILVNSRGEIKLCDFGVSGQLIDSM. . . ANSFVGTRSYMSPERLQGTHYSVQSDI
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   190.........200.........210......... 220.........230.........240......
 
   454.....460.........470........ .480.........490.........
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Query Sequence  WSFGILLTELTTKGRVPYPGMVNRE. . . . . . . . . . . . . . VLDQVERGYRMPCPPECPESL
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Template Sequence  WSMGLSLVEMAV. GRYPIPPPDAKELELMFGCPMAIFELLDYIVNEPPPKLPSAVFSLEF
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   247..250........ .260.........270.........280.........290.........300.....
 
   500.........510.........520..
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Query Sequence  HDLMCQCWRKEPEERPTFEYLQA
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Template Sequence  QDFVNKCLIKNPAERADLKQLMV
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   335....340.........350.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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