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Job DescriptionP05480
Confidence100.00%DateTue Jul 30 13:01:21 BST 2013
Rank237Aligned Residues264
% Identity27%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   267..270.........280.........290.........300.........310. ........320.....
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Query Sequence  AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS. PEAFLQEAQVMKKL
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Template Sequence  DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC
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   33......40.........50.........60.........70.........80.........90..
 
   326...330......... 340.........350.........360... ......370.........380..
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Query Sequence  RHEKLVQLYAVVSE. EPIYIVTEYMNKGSLLDFLKGETG. . KYLRLPQLVDMSAQIASGM
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Template Sequence  RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL
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   93......100.........110.........120.........130.........140.........150..
 
   383......390.........400.........410.........420.........430.........440..
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Query Sequence  AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA
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Template Sequence  HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK. GTELDQTHLVVKGTLGYIDPEYF
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   153......160.........170.........180........ .190.........200.........210.
 
   443......450.........460.........470.........480..... .
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Query Sequence  LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER. . . . . . . . . . . . . . . . G
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Template Sequence  IKGRLTEKSDVYSFGVVLFEVLC. ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPN
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   214.....220.........230...... ...240.........250.........260.........270..
 
   487..490.........500.........510.........520.........530..
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Query Sequence  YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE
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Template Sequence  LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE
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TT
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   273......280.........290.........300.........310........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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