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Job DescriptionP05480
Confidence100.00%DateTue Jul 30 13:01:21 BST 2013
Rank84Aligned Residues248
% Identity25%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280.........290......... 300..... ....310.........320.........330
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Query Sequence  ESLRLEVKLGQGCFGEVWMGTWNGTTR. VAIKTL. KPGTMSPEAFLQEAQVMKKLRHEKL
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Template Sequence  QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI
Template Known Secondary structure  TTTTT

TTT
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   26...30.........40.........50.........60.........70.........80.....
 
   331........340. ........350.........360.........370.........380.........
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Query Sequence  VQLYAVVSEEP. IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN
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Template Sequence  IRLYETFEDNTDIYLVMELCTGGELFERV. . VHKRVFRESDAARIMKDVLSAVAYCHKLN
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SGGGGG..TTTSS

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   86...90.........100.........110.... .....120.........130.........140...
 
   390.........400.. .......410.........420.........430.........440......
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Query Sequence  YVHRDLRAANILV. . . GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR
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Template Sequence  VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM. . MRTKVGTPYYVSPQVLEGL.
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SGGGSSSSTT




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   144.....150.........160.........170.........180. ........190.........200
 
   447..450.........460.........470.........480.........490.. .......500....
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Query Sequence  FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP. . PECPESLHDLMC
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Template Sequence  YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAESLIR
Template Known Secondary structure  B
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   201........210......... 220.........230.........240.........250.........
 
   505....510.........520.. ....
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Query Sequence  QCWRKEPEERPTFEYLQA. . FLED
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Template Sequence  RLLTKSPKQRITSLQALEHEWFEK
Template Known Secondary structure  S
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   261........270.........280....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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