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Job DescriptionP05480
Confidence99.36%DateTue Jul 30 13:01:21 BST 2013
Rank400Aligned Residues109
% Identity23%Templatec2hmhA_
PDB info PDB header:cytokine regulatorChain: A: PDB Molecule:suppressor of cytokine signaling 3; PDBTitle: crystal structure of socs3 in complex with gp130(ptyr757)2 phosphopeptide.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   145....150.........160.........170.........180.........190.........200....
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Query Sequence  VAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKG
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Template Sequence  VNAVRKLQESGFYWSAVTGGEANLLLS. . AEPAGTFLIRDSSDQRHFFTLSVKTQS. . . .
Template Known Secondary structure  TSSTT

..TS
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   35....40.........50.........60. ........70.........80........
 
   205....210.........220 .........230.........240.........250.........260
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Query Sequence  LNVKHYKIRKLDSGGF. . . . YITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQT
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Template Sequence  . GTKNLRIQEGGSFSLQSDPRSTQPVPRFDVLKLVHHYMPPQAYYIYKIPLVLSRPLSSN
Template Known Secondary structure  .B

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   8990.........100.........110.........120.........130.........140.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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