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Job DescriptionP05480
Confidence100.00%DateTue Jul 30 13:01:21 BST 2013
Rank108Aligned Residues246
% Identity26%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280.........290......... 300.........310.........320.........330.
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Query Sequence  ESLRLEVKLGQGCFGEVWMGTWNGTTR. VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLV
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRCP. ENIKKEICINKMLNHENVV
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   7..10.........20.........30.........40...... ...50.........60.....
 
   332.......340. ........350.........360.........370.........380.........390
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Query Sequence  QLYAVVSEEP. IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY
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Template Sequence  KFYGHRREGNIQYLFLEYCSGGELFDRI. . EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI
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STT


TTGGGGS..BTTTB

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   6970.........80.........90...... ...100.........110.........120......
 
   391........400.........410.........420. ........430.........440...... ..
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Query Sequence  VHRDLRAANILVGENLVCKVADFGLARLIED. NEYTARQGAKFPIKWTAPEAALYGR. FT
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Template Sequence  THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA
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S

SGGG
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   127..130.........140.........150.........160.........170.........180......
 
   449450.........460.........470.........480....... ..490.........500......
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Query Sequence  IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY. . RMPCPPECPESLHDLMCQC
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Template Sequence  EPVDVWSCGIVLTAMLA. GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI
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   187..190.........200... ......210.........220.........230.........240.....
 
   507..510.........520..
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Query Sequence  WRKEPEERPTFEYLQA
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Template Sequence  LVENPSARITIPDIKK
Template Known Secondary structure  S
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   246...250.........260.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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