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Job DescriptionP05480
Confidence100.00%DateTue Jul 30 13:01:21 BST 2013
Rank114Aligned Residues246
% Identity24%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   272.......280.........290......... 300.........310.... .....320.......
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Query Sequence  RESLRLEVKLGQGCFGEVWMGTWNGTTR. VAIKTLKPGTMSPEA. . . FLQEAQVMKKLRH
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH
Template Known Secondary structure  TTTTTTTT


SS




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   10.........20.........30.........40.........50.........60.........
 
   328.330.........340. ........350.........360.........370.........380......
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Query Sequence  EKLVQLYAVVSEEP. IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE
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Template Sequence  PNIVRLHDSIQEESFHYLVFDLVTGGELFEDI. . VAREFYSEADASHCIQQILESIAYCH
Template Known Secondary structure  TTB


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S
B..TT
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   70.........80.........90.........100. ........110.........120.......
 
   387..390.........400.. .......410.........420.........430.........440...
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Query Sequence  RMNYVHRDLRAANILV. . . GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAAL
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Template Sequence  SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA. . WHGFAGTPGYLSPEVLK
Template Known Secondary structure  TT
B



SGGGS
SSTT




TT
B

TT

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S
S
GGG

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   128.130.........140.........150.........160........ .170.........180.....
 
   444.....450.........460.........470.........480........ .490.........500
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Query Sequence  YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR. . . MPCPPECPESLH
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Template Sequence  KDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK
Template Known Secondary structure  T

B
T.SS
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SSTT




TTGGGGS
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   187..190.........200........ .210.........220.........230.........240.....
 
   501........510.........520..
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Query Sequence  DLMCQCWRKEPEERPTFEYLQA
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Template Sequence  SLIDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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TT
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   246...250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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