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Job DescriptionP05480
Confidence100.00%DateTue Jul 30 13:01:21 BST 2013
Rank142Aligned Residues247
% Identity22%Templatec1zrzA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c, iota; PDBTitle: crystal structure of the catalytic domain of atypical2 protein kinase c-iota
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   270.........280.........290......... 300...... ...310.........320....
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Query Sequence  IPRESLRLEVKLGQGCFGEVWMGTWNGTTR. VAIKTLK. . . . PGTMSPEAFLQEAQVMKK
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Template Sequence  LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ
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STT
SSTTT

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STTTTT
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   240.........250.........260.........270.........280.........290.........
 
   325....330.........340. ........350.........360.........370.........380..
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Query Sequence  . LRHEKLVQLYAVVSEEP. IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGM
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Template Sequence  ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR. . KLPEEHARFYSAEISLAL
Template Known Secondary structure  TTSSTTB


B
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   300.........310.........320.........330......... 340.........350.......
 
   383......390.........400.........410.........420.........430.........440..
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Query Sequence  AYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA
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Template Sequence  NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD. . TTSFCGTPNYIAPEIL
Template Known Secondary structure  TT
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GGG
TTS



TT
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TT
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GGG

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   358.360.........370.........380.........390......... 400.........410.....
 
   443......450.........460.........470.........480.........490.........500..
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Query Sequence  LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL
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Template Sequence  RGEDYGFSVDWWALGVLMFEMMA. GRSPFDQNTEDYLFQVILEK. QIRIPRSMSVKAASV
Template Known Secondary structure  TT

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   417..420.........430......... 440.........450......... 460.........470....
 
   503......510...... ...520..
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Query Sequence  MCQCWRKEPEERPT. . . . . . FEYLQA
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Template Sequence  LKSFLNKDPKERLGCLPQTGFADIQG
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   484.....490.........500.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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