Job Description P05480 Confidence 100.00% Date Tue Jul 30 13:01:21 BST 2013 Rank 252 Aligned Residues 250 % Identity 23% Template c1vzoA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal protein s6 kinase alpha 5; PDBTitle: the structure of the n-terminal kinase domain of msk12 reveals a novel autoinhibitory conformation for a dual3 kinase protein Resolution 1.8 Å

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		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.	300	.	.	.	.	.	.						.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.													.	.	.	.	.
Query SS confidence																												.	.	.	.													.	.	.	.	.
Query Sequence		E	I	P	R	E	S	L	R	L	E	V	K	L	G	Q	G	C	F	G	E	V	W	M	G	T	W	.	.	.	.	N	G	T	T	R	V	A	I	K	T	L	K	.	.	.	.	.	P	G	T	M	S	P	E	A	F	L	Q	E	A
Query Conservation																												.	.	.	.													.	.	.	.	.
Alig confidence																												.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		K	V	G	I	E	N	F	E	L	L	K	V	L	G	T	G	A	Y	G	K	V	F	L	V	R	K	I	S	G	H	D	T	G	K	L	Y	A	M	K	V	L	K	K	A	T	I	V	Q	K	A	K	T	T	E	H	T	R	T	E	R
Template Known Secondary structure					G	G	G										T	T	T										S	S	T	T	T	T									S									S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure					.																				.
Query SS confidence					.																				.
Query Sequence		Q	V	M	.	K	K	L	R	H	E	K	L	V	Q	L	Y	A	V	V	S	E	E	P	.	I	Y	I	V	T	E	Y	M	N	K	G	S	L	L	D	F	L	K	G	E	T	G	K	Y	L	R	L	P	Q	L	V	D	M	S	A	Q
Query Conservation					.																				.
Alig confidence					.																				.																						.	.
Template Conservation																																															.	.
Template Sequence		Q	V	L	E	H	I	R	Q	S	P	F	L	V	T	L	H	Y	A	F	Q	T	E	T	K	L	H	L	I	L	D	Y	I	N	G	G	E	L	F	T	H	L	S	Q	R	E	.	.	R	F	T	E	H	E	V	Q	I	Y	V	G	E
Template Known Secondary structure									T		T	T	B										T	T											S		B									S	.	.
Template Predicted Secondary structure																																															.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	S	G	M	A	Y	V	E	R	M	N	Y	V	H	R	D	L	R	A	A	N	I	L	V	G	E	N	L	V	C	K	V	A	D	F	G	L	A	R	L	I	E	D	N	E	Y	T	A	R	Q	G	A	K	F	P	I	K	W	T
Query Conservation
Alig confidence																																																										.
Template Conservation																																																										.
Template Sequence		I	V	L	A	L	E	H	L	H	K	L	G	I	I	Y	R	D	I	K	L	E	N	I	L	L	D	S	N	G	H	V	V	L	T	D	F	G	L	S	K	E	F	V	A	D	E	T	E	R	A	Y	D	F	C	G	T	.	I	E	Y
Template Known Secondary structure												T	T								G	G	G					T	T	S					S		S	S							G	G	G	G	G	G	G		G	G	G	S		.		T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.				.	.	.	490	.	.	.	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		A	P	E	A	A	L	Y	G	R	F	T	I	K	S	D	V	W	S	F	G	I	L	L	T	E	L	T	T	K	G	R	V	P	Y	P	G	M	V	N	R	E	V	L	D	Q	V	E	R	G	.	.	.	Y	R	M	P	C	P	P	E
Query Conservation																																																			.	.	.
Alig confidence																														.																					.	.	.
Template Conservation																														.
Template Sequence		M	A	P	D	I	V	R	G	G	D	D	K	A	V	D	W	W	S	L	G	V	L	M	Y	E	L	L	T	.	G	A	S	P	F	T	V	D	G	E	K	N	S	Q	A	E	I	S	R	R	I	L	K	S	E	P	P	Y	P	Q	E
Template Known Secondary structure								T	T				T																	.	S	S		T	T	S		T	T	S																				T	T
Template Predicted Secondary structure																														.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.						.	.	.	.	520	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		C	P	E	S	L	H	D	L	M	C	Q	C	W	R	K	E	P	E	E	R	P	.	.	.	.	.	T	F	E	Y	L	Q	A
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		M	S	A	L	A	K	D	L	I	Q	R	L	L	M	K	D	P	K	K	R	L	G	C	G	P	R	D	A	D	E	I	K	E
Template Known Secondary structure		S												T		S	S	G	G	G	S	T	T	S	S	T	T	T						T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D