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Job DescriptionP05480
Confidence99.35%DateTue Jul 30 13:01:21 BST 2013
Rank402Aligned Residues173
% Identity29%Templatec1griA_
PDB info PDB header:signal transduction adaptorChain: A: PDB Molecule:growth factor bound protein 2; PDBTitle: grb2
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   88.90.........100.........110.........120.........130.........140.......
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Query Sequence  FVALYDYESRTETDLSFKKGERLQIVNNTRKVDVREGDWWLAHSLSTGQTGYIPSNYVAP
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Template Sequence  AIAKYDFKATADDELSFKRGDILKVQN. . . . . . . . . . . WYKAEL. . NGKDGFIPKNYIEM
Template Known Secondary structure 
S
B


SSS


B
TT



...........S..SS
GGG
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   3......10.........20......... 30..... ....40.........
 
   148.150.........160.........170.........180.........190.........200.......
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Query Sequence  SDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNV
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Template Sequence  KPHPWFFGK. . . . . IPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGN. . . . . DV
Template Known Secondary structure 


SSB
TT.....

T
SSTT

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   56...60.... .....70.........80.........90.........100... ..
 
   208.210.........220.........230.........240.........250.........260...
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Query Sequence  KHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQTQGL. . . .
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Template Sequence  QHFKVLRDGAGKYFLWVVK. FNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQAL
Template Known Secondary structure 
SSS
SSS
.SSS
SSSSTT



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S
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   106...110.........120.... .....130.........140.........150.........160....
 
   264.....270.... .....280....
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Query Sequence  . . . . . . AKDAWEIPRES. LRLEVKLGQG
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Template Sequence  FDFDPQEDGELGFRRGDFIHVMDNSDPN
Template Known Secondary structure  S



SSTTB



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   165....170.........180.........190..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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