Phyre 2 alignment of P05480 with c2egcA_

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Job Description | P05480
Confidence | 99.06% | Date | Tue Jul 30 13:01:21 BST 2013
Rank | 441 | Aligned Residues | 68
% Identity | 26% | Template | c2egcA_
PDB info | PDB header:signaling protein | Chain: A: PDB Molecule:sh3 and px domain-containing protein 2a; | PDBTitle: solution structure of the fifth sh3 domain from human2 kiaa0418 protein
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | .
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | .
Query Sequence |  | Q | R | A | G | P | L | A | G | G | V | T | T | F | V | A | L | Y | D | Y | E | S | R | T | E | T | D | L | S | F | K | K | G | E | R | L | Q | I | V | N | N | T | R | K | V | D | V | R | E | G | D | W | W | L | A | H | S | L | S | T | .
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | .
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | .
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | S | S | G | S | S | G | N | L | K | D | V | Y | V | S | I | A | D | Y | E | G | D | . | E | E | T | A | G | F | Q | E | G | V | S | M | E | V | L | E | R | N | P | N | G | . | . | . | . | . | . | W | W | Y | C | Q | I | L | D | G | V
Template Known Secondary structure |  |  |  |  | S | S |  | S | S |  |  |  |  |  |  |  |  | S |  | B |  |  |  | . | S | S | S |  |  | B |  | T | T |  |  |  |  |  |  |  |  |  | T | T | S | . | . | . | . | . | . |  |  |  |  |  |  |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . |  | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . |  |  |  |  |  |  | . | . | . | . | . | . | 50 | . | . | .
|  |  | 135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150
Predicted Secondary structure |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | . | G | Q | T | G | Y | I | P | S | N | Y | V | A | P | S | D | S
Query Conservation |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | P | F | K | G | W | V | P | S | N | Y | L | E | K | K | N | S
Template Known Secondary structure |  | S |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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