Phyre 2 alignment of P05480 with c4aaaA_

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Job Description | P05480
Confidence | 100.00% | Date | Tue Jul 30 13:01:21 BST 2013
Rank | 287 | Aligned Residues | 239
% Identity | 28% | Template | c4aaaA_
PDB info | PDB header:transferase | Chain: A: PDB Molecule:cyclin-dependent kinase-like 2; | PDBTitle: crystal structure of the human cdkl2 kinase domain
Resolution | 1.53 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 268 | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . |  | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . |  |  |  | . | . | . | . | . | . | . | . | 320 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | W | E | I | P | R | E | S | L | R | L | E | V | K | L | G | Q | G | C | F | G | E | V | W | M | G | T | W | N | G | . | T | T | R | V | A | I | K | T | L | K | P | G | T | M | S | . | . | . | P | E | A | F | L | Q | E | A | Q | V | M | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | F | Q | S | M | E | K | Y | E | N | L | G | L | V | G | E | G | S | Y | G | M | V | M | K | C | R | N | K | D | T | G | R | I | V | A | I | K | K | F | L | E | S | D | D | D | K | M | V | K | K | I | A | M | R | E | I | K | L | L | K
Template Known Secondary structure |  |  |  | B |  | G | G | G |  |  |  |  |  |  | G | G | G | G | T | T | S | S |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  | S |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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