Phyre 2 alignment of P05480 with c2egeA_

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Job Description | P05480
Confidence | 98.93% | Date | Tue Jul 30 13:01:21 BST 2013
Rank | 497 | Aligned Residues | 65
% Identity | 14% | Template | c2egeA_
PDB info | PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:uncharacterized protein kiaa1666; | PDBTitle: solution structure of the third sh3 domain from human2 kiaa1666 protein
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | P | L | A | G | G | V | T | T | F | V | A | L | Y | D | Y | E | S | R | T | . | . | . | . | . | . | . | E | T | D | L | S | F | K | K | G | E | R | L | Q | I | V | N | N | T | R | K | V | D | V | R | E | G | D | W | W | L | A | H | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |
Template Sequence |  | G | S | S | G | S | S | G | K | I | M | I | A | A | L | D | Y | D | P | G | D | G | Q | M | G | G | Q | G | K | G | R | L | A | L | R | A | G | D | V | V | M | V | Y | G | P | M | D | D | Q | . | . | . | . | . | . | G | F | Y | Y | G | E
Template Known Secondary structure |  |  |  |  |  |  |  | S |  |  |  |  |  | S | S |  | B |  | T | T | T | T |  |  |  | S | S | S |  |  | B |  |  | B |  | T | T |  |  |  |  |  |  | S |  |  |  | T | T | . | . | . | . | . | . |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . | 50 | . | . | . | .
|  | 132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | S | T | G | Q | T | G | Y | I | P | S | N | Y | V | A | P | S | D | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | . | L | G | G | H | R | G | L | V | P | A | H | L | L | D | H | M | S | L
Template Known Secondary structure |  | . | S | S | S |  |  |  |  |  |  | T | T | T |  |  |  |  |  |
Template Predicted Secondary structure |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  | 55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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