Email l.a.kelley@imperial.ac.uk Description A0JLY1 Date Wed Jul 10 14:04:55 BST 2013 Unique Job ID eff52b4a6f8e5f27

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1deqO_ 27.4 4 PDB header:blood clotting Chain: O: PDB Molecule:fibrinogen (beta chain); PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution) 2 c3ghgK_ 25.3 9 PDB header:blood clotting Chain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen 3 c1deqF_ 23.6 3 PDB header:blood clotting Chain: F: PDB Molecule:fibrinogen (gamma chain); PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution) 4 c2ktaA_ 22.4 60 PDB header:hydrolase Chain: A: PDB Molecule:putative helicase; PDBTitle: solution nmr structure of a domain of protein a6ky75 from bacteroides2 vulgatus, northeast structural genomics target bvr106a 5 c3euhF_ 17.7 71 PDB header:cell cycle Chain: F: PDB Molecule:muke; PDBTitle: crystal structure of the muke-mukf complex 6 c1ei3E_ 17.6 10 PDB header:blood clotting Chain: E: PDB Molecule:fibrinogen; PDBTitle: crystal structure of native chicken fibrinogen 7 d1lgha_ 16.4 60 Fold:Light-harvesting complex subunits Superfamily:Light-harvesting complex subunits Family:Light-harvesting complex subunits 8 c3q8tB_ 16.1 14 PDB header:apoptosis Chain: B: PDB Molecule:beclin-1; PDBTitle: crystal structure of the coiled coil domain of beclin 1, an essential2 autophagy protein 9 c3swkB_ 12.2 10 PDB header:structural protein Chain: B: PDB Molecule:vimentin; PDBTitle: crystal structure of vimentin coil1b fragment 10 c4gkwB_ 11.8 14 PDB header:structural protein Chain: B: PDB Molecule:spindle assembly abnormal protein 6; PDBTitle: crystal structure of the coiled-coil domain of c. elegans sas-6 11 c3ol1A_ 11.5 12 PDB header:structural protein Chain: A: PDB Molecule:vimentin; PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b 12 c3tnuB_ 11.5 7 PDB header:cytosolic protein Chain: B: PDB Molecule:keratin, type ii cytoskeletal 5; PDBTitle: heterocomplex of coil 2b domains of human intermediate filament2 proteins, keratin 5 (krt5) and keratin 14 (krt14) 13 c2jeeA_ 11.1 13 PDB header:cell cycle Chain: A: PDB Molecule:yiiu; PDBTitle: xray structure of e. coli yiiu 14 d2euta1 11.0 20 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:CCP-like 15 c2gl2B_ 10.7 7 PDB header:cell adhesion Chain: B: PDB Molecule:adhesion a; PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,2 y69g) of bacterial adhesin fada 16 c1y4cA_ 10.7 11 PDB header:de novo protein Chain: A: PDB Molecule:maltose binding protein fused with designed PDBTitle: designed helical protein fusion mbp 17 c2qa7C_ 10.6 8 PDB header:actin binding Chain: C: PDB Molecule:huntingtin-interacting protein 1; PDBTitle: crystal structure of huntingtin-interacting protein 12 (hip1) coiled-coil domain with a basic surface suitable3 for hip-protein interactor (hippi) 18 c4avcA_ 10.5 43 PDB header:transferase Chain: A: PDB Molecule:lysine acetyltransferase; PDBTitle: crystal structure of protein lysine acetyltransferase rv09982 in complex with acetyl coa and camp 19 c2i1kA_ 10.5 10 PDB header:cell adhesion, membrane protein Chain: A: PDB Molecule:moesin; PDBTitle: moesin from spodoptera frugiperda reveals the coiled-coil domain at2 3.0 angstrom resolution 20 c2v66C_ 9.8 8 PDB header:structural protein Chain: C: PDB Molecule:nuclear distribution protein nude-like 1; PDBTitle: crystal structure of the coiled-coil domain of ndel1 (a.a.2 58 to 169)c 21 c4g7wB_ not modelled 9.4 44 PDB header:protein binding Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the n-terminal domain of the minor coat protein2 piii from ctxphi 22 c1hkgA_ not modelled 9.2 80 PDB header:transferase Chain: A: PDB Molecule:hexokinase a; PDBTitle: structural dynamics of yeast hexokinase during catalysis 23 d2arha1 not modelled 9.1 50 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:Aq 1966-like 24 c3lfkC_ not modelled 9.0 31 PDB header:unknown function Chain: C: PDB Molecule:marr like protein, tvg0766549; PDBTitle: a reported archaeal mechanosensitive channel is a structural2 homolog of marr-like transcriptional regulators 25 c2fxmB_ not modelled 8.8 8 PDB header:contractile protein Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform; PDBTitle: structure of the human beta-myosin s2 fragment 26 d1mxaa3 not modelled 8.3 25 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 27 d2p02a3 not modelled 8.2 25 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 28 c2o0hA_ not modelled 8.0 57 PDB header:hydrolase Chain: A: PDB Molecule:dna packaging protein gp17; PDBTitle: t4 gp17 atpase domain mutant complexed with atp 29 c3imlB_ not modelled 7.8 22 PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from burkholderia2 pseudomallei 30 c3so4C_ not modelled 7.8 17 PDB header:transferase Chain: C: PDB Molecule:methionine-adenosyltransferase; PDBTitle: methionine-adenosyltransferase from entamoeba histolytica 31 c2y3aB_ not modelled 7.7 11 PDB header:transferase Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit beta; PDBTitle: crystal structure of p110beta in complex with icsh2 of p85beta and2 the drug gdc-0941 32 c3a7pB_ not modelled 7.7 16 PDB header:protein transport Chain: B: PDB Molecule:autophagy protein 16; PDBTitle: the crystal structure of saccharomyces cerevisiae atg16 33 c3v32B_ not modelled 7.7 22 PDB header:hydrolase Chain: B: PDB Molecule:ribonuclease zc3h12a; PDBTitle: crystal structure of mcpip1 n-terminal conserved domain 34 d1qm4a3 not modelled 7.6 36 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 35 c4g7xA_ not modelled 7.5 44 PDB header:protein binding/protein binding Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a complex between the ctxphi piii n-terminal2 domain and the vibrio cholerae tola c-terminal domain 36 c3rv2B_ not modelled 7.5 17 PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from2 mycobacterium marinum 37 c1x4qA_ not modelled 7.5 71 PDB header:rna binding protein Chain: A: PDB Molecule:u4/u6 small nuclear ribonucleoprotein prp3; PDBTitle: solution structure of pwi domain in u4/u6 small nuclear2 ribonucleoprotein prp3(hprp3) 38 d1ig8a1 not modelled 7.4 80 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 39 d1czan3 not modelled 7.4 31 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 40 c3q4nA_ not modelled 7.3 12 PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein mj0754; PDBTitle: crystal structure of hypothetical protein mj0754 from methanococcus2 jannaschii dsm 2661 41 d1sbqa_ not modelled 7.2 60 Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:Methenyltetrahydrofolate synthetase 42 c1u3fA_ not modelled 7.2 60 PDB header:ligase Chain: A: PDB Molecule:5,10-methenyltetrahydrofolate synthetase; PDBTitle: structural and functional characterization of a 5,10-2 methenyltetrahydrofolate synthetase from mycoplasma3 pneumoniae (gi: 13508087) 43 c2d7gD_ not modelled 7.2 33 PDB header:hydrolase Chain: D: PDB Molecule:primosomal protein n; PDBTitle: crystal structure of the aa complex of the n-terminal2 domain of pria 44 c3dluA_ not modelled 7.2 14 PDB header:rna binding protein Chain: A: PDB Molecule:signal recognition particle 19 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. 45 d1bg3a3 not modelled 7.1 31 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 46 c2ppwA_ not modelled 6.8 60 PDB header:isomerase Chain: A: PDB Molecule:conserved domain protein; PDBTitle: the crystal structure of uncharacterized ribose 5-phosphate isomerase2 rpib from streptococcus pneumoniae 47 c3hnwB_ not modelled 6.8 13 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750 48 c3tnuA_ not modelled 6.8 12 PDB header:cytosolic protein Chain: A: PDB Molecule:keratin, type i cytoskeletal 14; PDBTitle: heterocomplex of coil 2b domains of human intermediate filament2 proteins, keratin 5 (krt5) and keratin 14 (krt14) 49 d2b5ga1 not modelled 6.7 29 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 50 c3b0dB_ not modelled 6.5 50 PDB header:dna binding protein Chain: B: PDB Molecule:centromere protein t; PDBTitle: crystal structure of the chicken cenp-t histone fold/cenp-w complex,2 crystal form ii 51 c3n4xB_ not modelled 6.5 10 PDB header:replication Chain: B: PDB Molecule:monopolin complex subunit csm1; PDBTitle: structure of csm1 full-length 52 d1qhda1 not modelled 6.3 22 Fold:A virus capsid protein alpha-helical domain Superfamily:A virus capsid protein alpha-helical domain Family:vp6, the major capsid protein of group A rotavirus 53 d1czan1 not modelled 6.3 31 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 54 c3u59C_ not modelled 6.2 6 PDB header:contractile protein Chain: C: PDB Molecule:tropomyosin beta chain; PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta 55 d1bg3a1 not modelled 6.2 60 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 56 c2vo9C_ not modelled 6.2 43 PDB header:hydrolase Chain: C: PDB Molecule:l-alanyl-d-glutamate peptidase; PDBTitle: crystal structure of the enzymatically active domain of the2 listeria monocytogenes bacteriophage 500 endolysin ply500 57 c2li5B_ not modelled 6.2 33 PDB header:protein transport Chain: B: PDB Molecule:ubiquitin-like modifier-activating enzyme atg7; PDBTitle: nmr structure of atg8-atg7c30 complex 58 c3vkhD_ not modelled 6.2 7 PDB header:motor protein Chain: D: PDB Molecule: PDBTitle: x-ray structure of a functional full-length dynein motor domain 59 c3v33A_ not modelled 6.1 22 PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease zc3h12a; PDBTitle: crystal structure of mcpip1 conserved domain with zinc-finger motif 60 d1apxa_ not modelled 6.1 13 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:CCP-like 61 c3c5yD_ not modelled 6.0 60 PDB header:isomerase Chain: D: PDB Molecule:ribose/galactose isomerase; PDBTitle: crystal structure of a putative ribose 5-phosphate isomerase2 (saro_3514) from novosphingobium aromaticivorans dsm at 1.81 a3 resolution 62 c1rg9D_ not modelled 6.0 25 PDB header:transferase Chain: D: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: s-adenosylmethionine synthetase complexed with sam and ppnp 63 d1dqua_ not modelled 6.0 50 Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Phosphoenolpyruvate mutase/Isocitrate lyase-like 64 c1ig8A_ not modelled 5.9 80 PDB header:transferase Chain: A: PDB Molecule:hexokinase pii; PDBTitle: crystal structure of yeast hexokinase pii with the correct2 amino acid sequence 65 c3c0mB_ not modelled 5.9 60 PDB header:toxin Chain: B: PDB Molecule:aerolysin; PDBTitle: crystal structure of the proaerolysin mutant y221g 66 d1v4sa1 not modelled 5.9 36 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 67 c2jx3A_ not modelled 5.9 50 PDB header:dna binding protein Chain: A: PDB Molecule:protein dek; PDBTitle: nmr solution structure of the n-terminal domain of dek 68 d1bdga1 not modelled 5.9 43 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Hexokinase 69 c1ci6B_ not modelled 5.7 24 PDB header:transcription Chain: B: PDB Molecule:transcription factor c/ebp beta; PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer 70 c2obvA_ not modelled 5.6 36 PDB header:transferase Chain: A: PDB Molecule:s-adenosylmethionine synthetase isoform type-1; PDBTitle: crystal structure of the human s-adenosylmethionine synthetase 1 in2 complex with the product 71 d1erpa_ not modelled 5.4 60 Fold:Protozoan pheromone-like Superfamily:Protozoan pheromone proteins Family:Protozoan pheromone proteins 72 c4f4mA_ not modelled 5.4 28 PDB header:hydrolase regulator Chain: A: PDB Molecule:papain peptidoglycan amidase effector tse1; PDBTitle: structure of the type vi peptidoglycan amidase effector tse1 (c30a)2 from pseudomonas aeruginosa 73 c1wd6B_ not modelled 5.4 60 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein ydhr; PDBTitle: crystal structure of jw1657 from escherichia coli 74 c3ef5A_ not modelled 5.3 19 PDB header:hydrolase Chain: A: PDB Molecule:probable pyrophosphohydrolase; PDBTitle: structure of the rna pyrophosphohydrolase bdrpph in complex with dgtp 75 c2lkgA_ not modelled 5.3 44 PDB header:signaling protein Chain: A: PDB Molecule:acetylcholine receptor; PDBTitle: wsa major conformation 76 c3ey5A_ not modelled 5.2 57 PDB header:transferase Chain: A: PDB Molecule:acetyltransferase-like, gnat family; PDBTitle: putative acetyltransferase from gnat family from bacteroides2 thetaiotaomicron. 77 c1v4sA_ not modelled 5.1 36 PDB header:transferase Chain: A: PDB Molecule:glucokinase isoform 2; PDBTitle: crystal structure of human glucokinase 78 c3hy4A_ not modelled 5.1 50 PDB header:ligase Chain: A: PDB Molecule:5-formyltetrahydrofolate cyclo-ligase; PDBTitle: structure of human mthfs with n5-iminium phosphate 79 c2wuhD_ not modelled 5.1 50 PDB header:receptor/peptide Chain: D: PDB Molecule:collagen peptide; PDBTitle: crystal structure of the ddr2 discoidin domain bound to a2 triple-helical collagen peptide 80 d2vo9a1 not modelled 5.0 43 Fold:Hedgehog/DD-peptidase Superfamily:Hedgehog/DD-peptidase Family:VanY-like