Email l.a.kelley@imperial.ac.uk Description Q9JJP2 Date Wed Jul 10 14:03:07 BST 2013 Unique Job ID ed9ca3bbbc4877c6

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3q06B_ 100.0 55 PDB header:cell cycle/dna Chain: B: PDB Molecule:cellular tumor antigen p53; PDBTitle: an induced fit mechanism regulates p53 dna binding kinetics to confer2 sequence specificity 2 c2rmnA_ 100.0 77 PDB header:cell cycle, antitumor protein Chain: A: PDB Molecule:tumor protein 63; PDBTitle: the solution structure of the p63 dna-binding domain 3 c2j1xA_ 100.0 59 PDB header:nuclear protein Chain: A: PDB Molecule:cellular tumor antigen p53; PDBTitle: human p53 core domain mutant m133l-v203a-y220c-n239y-n268d 4 c2xipA_ 100.0 96 PDB header:cell cycle Chain: A: PDB Molecule:tumour protein p73; PDBTitle: crystal structure of the dna binding domain of human tp732 refined at 1.8 a resolution 5 d2ac0a1 100.0 59 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:p53-like transcription factors Family:p53 DNA-binding domain-like 6 d1hu8a_ 100.0 60 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:p53-like transcription factors Family:p53 DNA-binding domain-like 7 d1rg6a_ 99.9 45 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 8 d1dxsa_ 99.8 95 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 9 c4a9zC_ 99.7 54 PDB header:transcription Chain: C: PDB Molecule:tumor protein 63; PDBTitle: crystal structure of human p63 tetramerization domain 10 c4a9zD_ 99.6 57 PDB header:transcription Chain: D: PDB Molecule:tumor protein 63; PDBTitle: crystal structure of human p63 tetramerization domain 11 c2wttL_ 99.6 83 PDB header:transcription Chain: L: PDB Molecule:tumor protein p73; PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii) 12 c2wttH_ 99.5 85 PDB header:transcription Chain: H: PDB Molecule:tumor protein p73; PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii) 13 c2wttN_ 99.5 85 PDB header:transcription Chain: N: PDB Molecule:tumor protein p73; PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii) 14 c3zy1A_ 99.5 53 PDB header:transcription Chain: A: PDB Molecule:tumor protein 63; PDBTitle: crystal structure of the human p63 tetramerization domain 15 d1coka_ 99.4 93 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 16 c2wqjK_ 98.8 83 PDB header:transcription Chain: K: PDB Molecule:tumor protein p73; PDBTitle: crystal structure of a truncated variant of the human p732 tetramerization domain 17 c2wqjM_ 98.5 82 PDB header:transcription Chain: M: PDB Molecule:tumor protein p73; PDBTitle: crystal structure of a truncated variant of the human p732 tetramerization domain 18 d3saka_ 98.4 38 Fold:p53 tetramerization domain Superfamily:p53 tetramerization domain Family:p53 tetramerization domain 19 d1t4wa_ 98.1 23 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:p53-like transcription factors Family:p53 DNA-binding domain-like 20 c2e8nA_ 98.1 18 PDB header:transferase, signaling protein Chain: A: PDB Molecule:ephrin type-a receptor 2; PDBTitle: solution structure of the c-terminal sam-domain of ephaa2:2 ephrin type-a receptor 2 precursor (ec 2.7.10.1) 21 c2eaoA_ not modelled 98.0 16 PDB header:signaling protein, transferase Chain: A: PDB Molecule:ephrin type-b receptor 1; PDBTitle: solution structure of the c-terminal sam-domain of mouse2 ephrin type-b receptor 1 precursor (ec 2.7.1.112) 22 c1b0xA_ not modelled 98.0 15 PDB header:transferase Chain: A: PDB Molecule:protein (epha4 receptor tyrosine kinase); PDBTitle: the crystal structure of an eph receptor sam domain reveals2 a mechanism for modular dimerization. 23 d1b0xa_ not modelled 98.0 15 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 24 d1sgga_ not modelled 98.0 18 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 25 c3h8mB_ not modelled 97.9 21 PDB header:transferase Chain: B: PDB Molecule:ephrin type-a receptor 7; PDBTitle: sam domain of human ephrin type-a receptor 7 (epha7) 26 d1x40a1 not modelled 97.8 15 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 27 c3senD_ not modelled 97.8 17 PDB header:signaling protein Chain: D: PDB Molecule:caskin-1; PDBTitle: structure of caskin1 tandem sams 28 c2dl0A_ 97.8 18 PDB header:signaling protein Chain: A: PDB Molecule:sam and sh3 domain-containing protein 1; PDBTitle: solution structure of the sam-domain of the sam and sh32 domain containing protein 1 29 c2kg5A_ not modelled 97.8 20 PDB header:signaling protein Chain: A: PDB Molecule:arf-gap, rho-gap domain, ank repeat and ph PDBTitle: nmr solution structure of arap3-sam 30 c3kkaD_ not modelled 97.8 20 PDB header:transferase Chain: D: PDB Molecule:ephrin type-a receptor 2; PDBTitle: co-crystal structure of the sam domains of epha1 and epha2 31 c3k1rB_ not modelled 97.8 19 PDB header:structural protein Chain: B: PDB Molecule:usher syndrome type-1g protein; PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans 32 d1b4fa_ not modelled 97.8 18 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 33 d1v38a_ not modelled 97.7 14 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 34 c2k4pA_ not modelled 97.6 20 PDB header:signaling protein Chain: A: PDB Molecule:phosphatidylinositol-3,4,5-trisphosphate 5- PDBTitle: solution structure of ship2-sam 35 d1aiea_ not modelled 97.6 41 Fold:p53 tetramerization domain Superfamily:p53 tetramerization domain Family:p53 tetramerization domain 36 d1ucva_ not modelled 97.6 14 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 37 c3hilB_ not modelled 97.6 23 PDB header:transferase Chain: B: PDB Molecule:ephrin type-a receptor 1; PDBTitle: sam domain of human ephrin type-a receptor 1 (epha1) 38 d1hs5a_ not modelled 97.5 41 Fold:p53 tetramerization domain Superfamily:p53 tetramerization domain Family:p53 tetramerization domain 39 c2eamA_ not modelled 97.5 16 PDB header:signaling protein Chain: A: PDB Molecule:putative 47 kda protein; PDBTitle: solution structure of the n-terminal sam-domain of a human2 putative 47 kda protein 40 c1oxjA_ not modelled 97.5 14 PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein smaug; PDBTitle: crystal structure of the smaug rna binding domain 41 d1a1ua_ not modelled 97.5 41 Fold:p53 tetramerization domain Superfamily:p53 tetramerization domain Family:p53 tetramerization domain 42 c2lmrA_ not modelled 97.5 20 PDB header:signaling protein Chain: A: PDB Molecule:ankyrin repeat and sam domain-containing protein 1a; PDBTitle: solution structure of the first sam domain of odin 43 c2j10D_ not modelled 97.4 41 PDB header:transcription Chain: D: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant t329f q331k 44 c2j10A_ not modelled 97.4 41 PDB header:transcription Chain: A: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant t329f q331k 45 c2j10B_ not modelled 97.4 41 PDB header:transcription Chain: B: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant t329f q331k 46 c3zy0C_ not modelled 97.4 58 PDB header:transcription Chain: C: PDB Molecule:tumor protein p63; PDBTitle: crystal structure of a truncated variant of the human p632 tetramerization domain lacking the c-terminal helix 47 c2fe9A_ not modelled 97.4 17 PDB header:rna binding protein Chain: A: PDB Molecule:protein vts1; PDBTitle: solution structure of the vts1 sam domain in the presence2 of rna 48 c1ow5A_ not modelled 97.4 25 PDB header:transferase Chain: A: PDB Molecule:serine/threonine-protein kinase ste11; PDBTitle: nmr structure of the saccharomyces cerevisiae sam (sterile2 alpha motif) domain 49 d1ow5a_ not modelled 97.4 25 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 50 c2j11D_ not modelled 97.4 41 PDB header:transcription Chain: D: PDB Molecule:cellular tumor antigen p53; PDBTitle: p53 tetramerization domain mutant y327s t329g q331g 51 c2ke7A_ not modelled 97.3 17 PDB header:protein binding Chain: A: PDB Molecule:ankyrin repeat and sterile alpha motif domain- PDBTitle: nmr structure of the first sam domain from aida1 52 c2kivA_ not modelled 97.3 20 PDB header:signaling protein Chain: A: PDB Molecule:ankyrin repeat and sterile alpha motif domain- PDBTitle: aida-1 sam domain tandem 53 d1oxja1 not modelled 97.3 18 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 54 c2qkqA_ not modelled 97.2 21 PDB header:transferase Chain: A: PDB Molecule:ephrin type-b receptor 4; PDBTitle: structure of the sam domain of human ephrin type-b receptor2 4 55 c3bq7A_ not modelled 96.9 23 PDB header:transferase Chain: A: PDB Molecule:diacylglycerol kinase delta; PDBTitle: sam domain of diacylglycerol kinase delta1 (e35g) 56 c2b6gA_ not modelled 96.8 14 PDB header:rna binding protein Chain: A: PDB Molecule:vts1p; PDBTitle: rna recognition by the vts1 sam domain 57 c2eseA_ not modelled 96.8 14 PDB header:protein/rna complex Chain: A: PDB Molecule:vts1p; PDBTitle: structure of the sam domain of vts1p in complex with rna 58 c2gleA_ not modelled 96.7 27 PDB header:protein binding Chain: A: PDB Molecule:neurabin-1; PDBTitle: solution structure of neurabin sam domain 59 d2f3na1 not modelled 96.5 27 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 60 c2l14B_ 96.4 32 PDB header:protein binding Chain: B: PDB Molecule:cellular tumor antigen p53; PDBTitle: structure of cbp nuclear coactivator binding domain in complex with2 p53 tad 61 c3tadB_ not modelled 96.4 26 PDB header:protein binding Chain: B: PDB Molecule:liprin-alpha-2; PDBTitle: crystal structure of the liprin-alpha/liprin-beta complex 62 c2ly4B_ 95.7 33 PDB header:nuclear protein/antitumour protein Chain: B: PDB Molecule:cellular tumor antigen p53; PDBTitle: hmgb1-facilitated p53 dna binding occurs via hmg-box/p532 transactivation domain interaction and is regulated by the acidic3 tail 63 c3bs5A_ not modelled 95.5 18 PDB header:signaling protein/membrane protein Chain: A: PDB Molecule:protein aveugle; PDBTitle: crystal structure of hcnk2-sam/dhyp-sam complex 64 d1wwva1 not modelled 95.5 24 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 65 c2dkzA_ not modelled 95.4 26 PDB header:signaling protein Chain: A: PDB Molecule:hypothetical protein loc64762; PDBTitle: solution structure of the sam_pnt-domain of the2 hypothetical protein loc64762 66 c2eanA_ not modelled 95.2 19 PDB header:signaling protein Chain: A: PDB Molecule:connector enhancer of kinase suppressor of ras 2; PDBTitle: solution structure of the n-terminal sam-domain of human2 kiaa0902 protein (connector enhancer of kinase suppressor3 of ras 2) 67 c3bs7A_ not modelled 94.6 18 PDB header:signaling protein Chain: A: PDB Molecule:protein aveugle; PDBTitle: crystal structure of the sterile alpha motif (sam) domain2 of hyphen/aveugle 68 d1pk1c1 not modelled 93.3 18 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 69 d1kw4a_ not modelled 93.3 19 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 70 d1pk3a1 not modelled 92.6 9 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 71 c1pk1A_ not modelled 92.1 20 PDB header:transcription repression Chain: A: PDB Molecule:polyhomeotic-proximal chromatin protein; PDBTitle: hetero sam domain structure of ph and scm. 72 c2k8fB_ not modelled 90.5 32 PDB header:transferase/transcription Chain: B: PDB Molecule:cellular tumor antigen p53; PDBTitle: structural basis for the regulation of p53 function by p300 73 c2e8oA_ not modelled 88.9 22 PDB header:signaling protein Chain: A: PDB Molecule:sam domain and hd domain-containing protein 1; PDBTitle: solution structure of the n-terminal sam-domain of the sam2 domain and hd domain containing protein 1 (dendritic cell-3 derived ifng-induced protein) (dcip) (monocyte protein 5)4 (mop-5) 74 c1pk1B_ not modelled 88.8 9 PDB header:transcription repression Chain: B: PDB Molecule:sex comb on midleg cg9495-pa; PDBTitle: hetero sam domain structure of ph and scm. 75 c1v85A_ not modelled 88.2 23 PDB header:apoptosis Chain: A: PDB Molecule:similar to ring finger protein 36; PDBTitle: sterile alpha motif (sam) domain of mouse bifunctional2 apoptosis regulator 76 c2l5yA_ not modelled 80.9 15 PDB header:signaling protein Chain: A: PDB Molecule:stromal interaction molecule 2; PDBTitle: nmr structure of calcium-loaded stim2 ef-sam. 77 d1uqva_ not modelled 80.4 10 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 78 c1q2iA_ not modelled 59.8 50 PDB header:antitumor protein Chain: A: PDB Molecule:pnc27; PDBTitle: nmr solution structure of a peptide from the mdm-2 binding2 domain of the p53 protein that is selectively cytotoxic to3 cancer cells 79 c3if8B_ not modelled 51.7 22 PDB header:cell cycle Chain: B: PDB Molecule:protein zwilch homolog; PDBTitle: crystal structure of zwilch, a member of the rzz kinetochore complex 80 c3no4A_ not modelled 51.2 13 PDB header:hydrolase Chain: A: PDB Molecule:creatinine amidohydrolase; PDBTitle: crystal structure of a creatinine amidohydrolase (npun_f1913) from2 nostoc punctiforme pcc 73102 at 2.00 a resolution 81 c2rp5A_ not modelled 48.5 19 PDB header:transcription Chain: A: PDB Molecule:putative uncharacterized protein cep-1; PDBTitle: solution structure of the oligomerization domain in cep-1 82 c2k60A_ not modelled 45.6 19 PDB header:signaling protein Chain: A: PDB Molecule:protein (stromal interaction molecule 1); PDBTitle: nmr structure of calcium-loaded stim1 ef-sam 83 c3dacB_ not modelled 45.5 36 PDB header:cell cycle Chain: B: PDB Molecule:cellular tumor antigen p53; PDBTitle: structure of the human mdmx protein bound to the p53 tumor2 suppressor transactivation domain 84 d2a1ja1 not modelled 41.7 15 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 85 c3dacP_ not modelled 37.7 42 PDB header:cell cycle Chain: P: PDB Molecule:cellular tumor antigen p53; PDBTitle: structure of the human mdmx protein bound to the p53 tumor2 suppressor transactivation domain 86 c3gycB_ not modelled 33.5 57 PDB header:hydrolase Chain: B: PDB Molecule:putative glycoside hydrolase; PDBTitle: crystal structure of putative glycoside hydrolase (yp_001304622.1)2 from parabacteroides distasonis atcc 8503 at 1.85 a resolution 87 c2xseA_ not modelled 31.5 56 PDB header:oxidoreductase Chain: A: PDB Molecule:thymine dioxygenase jbp1; PDBTitle: the structural basis for recognition of j-base containing2 dna by a novel dna-binding domain in jbp1 88 d2aq0a1 not modelled 30.6 13 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 89 d1b22a_ not modelled 29.6 10 Fold:SAM domain-like Superfamily:Rad51 N-terminal domain-like Family:DNA repair protein Rad51, N-terminal domain 90 c1b22A_ not modelled 29.6 10 PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad51; PDBTitle: rad51 (n-terminal domain) 91 c2xdvA_ not modelled 28.8 17 PDB header:nuclear protein Chain: A: PDB Molecule:myc-induced nuclear antigen; PDBTitle: crystal structure of the catalytic domain of flj14393 92 c1v9pB_ not modelled 27.6 19 PDB header:ligase Chain: B: PDB Molecule:dna ligase; PDBTitle: crystal structure of nad+-dependent dna ligase 93 c3cguB_ not modelled 27.4 44 PDB header:hormone/signaling protein Chain: B: PDB Molecule:protein giant-lens; PDBTitle: crystal structure of unliganded argos 94 c3lubE_ not modelled 27.2 19 PDB header:hydrolase Chain: E: PDB Molecule:putative creatinine amidohydrolase; PDBTitle: crystal structure of putative creatinine amidohydrolase2 (yp_211512.1) from bacteroides fragilis nctc 9343 at 2.11 a3 resolution 95 c3nb2B_ not modelled 26.7 17 PDB header:ligase Chain: B: PDB Molecule:secreted effector protein; PDBTitle: crystal structure of e. coli o157:h7 effector protein nlel 96 c4joiA_ not modelled 25.4 11 PDB header:dna binding protein Chain: A: PDB Molecule:cst complex subunit stn1; PDBTitle: crystal structure of the human telomeric stn1-ten1 complex 97 c2owoA_ not modelled 24.7 19 PDB header:ligase/dna Chain: A: PDB Molecule:dna ligase; PDBTitle: last stop on the road to repair: structure of e.coli dna ligase bound2 to nicked dna-adenylate 98 d1lb2b_ not modelled 23.9 19 Fold:SAM domain-like Superfamily:C-terminal domain of RNA polymerase alpha subunit Family:C-terminal domain of RNA polymerase alpha subunit 99 d1doqa_ not modelled 23.7 22 Fold:SAM domain-like Superfamily:C-terminal domain of RNA polymerase alpha subunit Family:C-terminal domain of RNA polymerase alpha subunit 100 c4akaA_ not modelled 23.3 42 PDB header:immune system Chain: A: PDB Molecule:il-4-inducing protein; PDBTitle: ipse alpha-1, an ige-binding crystallin 101 d1v7za_ not modelled 23.2 44 Fold:Creatininase Superfamily:Creatininase Family:Creatininase 102 d1cooa_ not modelled 22.3 19 Fold:SAM domain-like Superfamily:C-terminal domain of RNA polymerase alpha subunit Family:C-terminal domain of RNA polymerase alpha subunit 103 d1jx4a2 not modelled 22.1 8 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:Lesion bypass DNA polymerase (Y-family), catalytic domain 104 c4diqA_ not modelled 22.0 25 PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific demethylase no66; PDBTitle: crystal structure of human no66