Job Description Q9JJP2 Confidence 100.00% Date Wed Jul 10 14:03:07 BST 2013 Rank 6 Aligned Residues 186 % Identity 60% Template d1hu8a_ SCOP info Common fold of diphtheria toxin/transcription factors/cytochrome f p53-like transcription factors p53 DNA-binding domain-like Resolution 2.70 Model Dimensions (Å) X:50.050 Y:46.822 Z:38.875

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	P	G	P	H	H	F	E	V	T	F	Q	Q	S	S	T	A	K	S	A	T	W	T	Y	S	P	L	L	K	K	L	Y	C	Q	I	A	K	T	C	P	I	Q	I	K	V	S	T	P	P	P	P	G	T	A	I	R	A	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Y	Q	G	N	Y	G	F	H	L	G	F	L	Q	S	G	T	A	K	S	V	M	C	T	Y	S	P	P	L	N	K	L	F	C	Q	L	A	K	T	C	P	V	Q	L	W	V	S	A	T	P	P	A	G	S	R	V	R	A	M	A
Template Known Secondary structure			B			T	T											S		S	S		S					T	T	T	T						T	T										S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	K	K	A	E	H	V	T	D	I	V	K	R	C	P	N	H	E	L	G	R	D	F	N	E	G	Q	S	A	P	A	S	H	L	I	R	V	E	G	N	N	L	A	Q	Y	V	D	D	P	V	T	G	R	Q	S	V	V	V	P
Query Conservation
Alig confidence																													.	.
Template Conservation																													.	.
Template Sequence		I	Y	K	K	S	Q	H	M	T	E	V	V	R	R	C	P	H	H	E	R	C	S	D	G	D	G	L	.	.	A	P	P	Q	H	L	I	R	V	E	G	N	L	A	P	E	Y	L	E	D	R	Q	T	F	R	H	S	V	V	V	P
Template Known Secondary structure				S	S	T	T	S	T	T	S										T						S	S	.	.	S		T	T		S					S		S								T	T	T
Template Predicted Secondary structure																													.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	P	P	Q	V	G	T	E	F	T	T	I	L	Y	N	F	M	C	N	S	S	C	V	G	G	M	N	R	R	P	I	L	V	I	I	T	L	E	T	R	D	G	Q	V	L	G	R	R	S	F	E	G	R	I	C	A	C	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	P	P	E	A	G	S	E	Y	T	T	I	H	Y	K	Y	M	C	N	S	S	C	M	G	G	M	N	R	R	P	I	L	T	I	I	T	L	E	D	S	S	G	N	L	L	G	R	D	S	F	E	V	R	V	C	A	C	P	G
Template Known Secondary structure							T	T		S	S									S		T	T		T	T	T	T	T	T												T	T	S														S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		292	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	R	K	A	D	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	R	R	T	E	E	E
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D