Job Description Q9JJP2 Confidence 23.68% Date Wed Jul 10 14:03:07 BST 2013 Rank 99 Aligned Residues 27 % Identity 22% Template d1doqa_ SCOP info SAM domain-like C-terminal domain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	C	F	T	S	Q	G	L	Q	S	I	Y	H	L	Q	N	L	T	I	E	D	L	G	A	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	S	L	K	E	E	G	I	E	S	V	R	A	L	L	A	L	N	L	K	D	L	K	N	I	P
Template Known Secondary structure								T	T			S							S						T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D