Job Description Q9JJP2 Confidence 96.40% Date Wed Jul 10 14:03:07 BST 2013 Rank 61 Aligned Residues 78 % Identity 26% Template c3tadB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:liprin-alpha-2; PDBTitle: crystal structure of the liprin-alpha/liprin-beta complex Resolution 2.90 Å

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		476	.	.	.	480	.	.	.	.	.	.	.	.			.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.		.	.	530	.
Predicted Secondary structure															.	.																																					.				.
Query SS confidence															.	.																																					.				.
Query Sequence		T	P	P	P	P	Y	H	A	D	P	S	L	V	.	.	S	F	L	T	G	L	G	C	P	N	C	I	E	C	F	T	S	Q	G	L	Q	S	I	Y	H	L	Q	N	L	T	I	E	D	L	G	A	.	L	K	V	.	P	D	Q	Y
Query Conservation															.	.																																					.				.
Alig confidence															.	.																					.																.				.
Template Conservation																																					.
Template Sequence		S	P	S	A	Y	G	D	M	N	H	E	W	I	G	N	E	W	L	P	S	L	G	L	P	Q	Y	R	S	Y	F	M	E	C	L	V	.	D	A	R	M	L	D	H	L	T	K	K	D	L	R	V	H	L	K	M	V	D	S	F	H
Template Known Secondary structure		S	S					T	T								T					T	T		G	G	G							T	T		.						T	T									T	S
Template Predicted Secondary structure																																					.
Template SS confidence
		966	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000		.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	T	I	W	R	G	L	Q	D	L	K	Q	S	H	D	C	G	Q	Q	L	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	S	L	Q	Y	G	I	M	C	L	K	R	L	N	Y	D	R	K	E	L	E	R
Template Known Secondary structure															T	T	T
Template Predicted Secondary structure
Template SS confidence
		1071	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D