Job Description Q9JJP2 Confidence 100.00% Date Wed Jul 10 14:03:07 BST 2013 Rank 1 Aligned Residues 229 % Identity 55% Template c3q06B_ PDB info PDB header:cell cycle/dna Chain: B: PDB Molecule:cellular tumor antigen p53; PDBTitle: an induced fit mechanism regulates p53 dna binding kinetics to confer2 sequence specificity Resolution 3.20 Å Model Dimensions (Å) X:47.637 Y:58.980 Z:41.001

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	P	S	N	T	D	Y	P	G	P	H	H	F	E	V	T	F	Q	Q	S	S	T	A	K	S	A	T	W	T	Y	S	P	L	L	K	K	L	Y	C	Q	I	A	K	T	C	P	I	Q	I	K	V	S	T	P	P	P	P	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	P	S	Q	K	T	Y	Q	G	S	Y	G	F	R	L	G	F	L	H	S	G	T	A	K	S	V	T	C	T	Y	S	P	A	L	N	K	M	F	V	Q	L	A	K	T	V	P	V	Q	L	Y	V	D	S	T	P	P	P	G	T
Template Known Secondary structure											T	T	T	T				B								T	T		S			B		T	T	T							T	T										S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	R	A	M	P	V	Y	K	K	A	E	H	V	T	D	I	V	K	R	C	P	N	H	E	L	G	R	D	F	N	E	G	Q	S	A	P	A	S	H	L	I	R	V	E	G	N	N	L	A	Q	Y	V	D	D	P	V	T	G	R
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		R	V	R	A	M	A	I	Y	K	Q	S	Q	H	M	T	E	V	V	R	R	C	P	H	H	E	R	S	S	D	S	D	G	L	.	.	A	P	P	Q	H	L	I	R	V	E	G	N	L	R	A	E	Y	L	D	D	P	N	T	F	R
Template Known Secondary structure											S	T	T	T	T	T	S										T				S		S	S	.	.	S		S	S		S				S	S		T	T							T	T	T
Template Predicted Secondary structure																																			.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	V	V	V	P	Y	E	P	P	Q	V	G	T	E	F	T	T	I	L	Y	N	F	M	C	N	S	S	C	V	G	G	M	N	R	R	P	I	L	V	I	I	T	L	E	T	R	D	G	Q	V	L	G	R	R	S	F	E	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	S	V	V	V	P	Y	E	P	P	E	V	G	S	D	Y	T	T	I	Y	F	K	F	M	C	N	S	S	C	M	G	G	M	N	R	R	P	I	L	V	I	I	T	L	E	D	S	S	G	N	L	L	G	R	D	S	F	E	V	R
Template Known Secondary structure													S	S												S		T	T		T	T	T	T	T	T												T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	A	C	P	G	R	D	R	K	A	D	E	D	H	Y	R	E	Q	Q	A	L	N	E	S	T	T	K	N	G	A	A	S	K	R	A	F	K	Q	S	P	P	A	I	P	A	L	G	T	N	V	K	K	R	R	H	G	D	E	D
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	C	A	C	P	G	R	D	R	R	T	E	E	E	N	L	R	K	K	K	T	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	E
Template Known Secondary structure				S		T	T									T	T	S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.																																				.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	Y	M	H	V	R	G	R	E	N	F	E	I	L	M	K	V	K	E	S	L	E	L	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	F	T	L	Q	I	R	G	R	E	R	F	E	Q	F	R	E	R	N	E	A	L	E	L	K	D
Template Known Secondary structure										S					T	T	T	T	T	T	S	S	S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D