Job Description Q9JJP2 Confidence 97.75% Date Wed Jul 10 14:03:07 BST 2013 Rank 31 Aligned Residues 64 % Identity 19% Template c3k1rB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:usher syndrome type-1g protein; PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans Resolution 2.30 Å

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		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	V	S	F	L	T	G	L	G	C	P	N	C	I	E	C	F	T	S	Q	G	L	Q	S	I	Y	H	L	Q	N	L	T	I	E	D	L	G	A	L	K	V	P	D	Q	Y	R	M	T	I	W	R	G	L	Q	D	L	K	Q	S
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		P	L	E	T	F	L	A	S	L	H	M	E	D	F	A	A	L	L	R	Q	E	K	I	.	D	L	E	A	L	M	L	C	S	D	L	D	L	R	S	I	S	V	P	L	G	P	R	E	K	I	L	G	A	V	R	R	R	R	Q	A
Template Known Secondary structure									T	T	T		G	G	G							T	T		.						T	T									T	T
Template Predicted Secondary structure																									.
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.		.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		546	.	.	.	550
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	C	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	R	P	P
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		450	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D