Job Description Q9JJP2 Confidence 95.67% Date Wed Jul 10 14:03:07 BST 2013 Rank 62 Aligned Residues 46 % Identity 33% Template c2ly4B_ PDB info PDB header:nuclear protein/antitumour protein Chain: B: PDB Molecule:cellular tumor antigen p53; PDBTitle: hmgb1-facilitated p53 dna binding occurs via hmg-box/p532 transactivation domain interaction and is regulated by the acidic3 tail Resolution UNK Model Dimensions (Å) X:19.186 Y:54.082 Z:41.398

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	S	T	F	E	H	L	W	S	S	L	E	P	D	S	T	Y	F	D	L	P	Q	P	S	Q	G	T	S	E	A	S	G	S	E	E	S	N	M	D	V	F	H	L	Q	G	M	A	Q	F	N	L	L	S	S	A	M	D	Q	M
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Q	E	T	F	S	D	L	W	K	L	L	P	E	N	N	V	L	S	P	L	P	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M	D	.	.	.	.	.	.	.	.	.	.	D	L	M	L	S	P	D	D	I	E
Template Known Secondary structure				S	S	T	T	T	T	T	T	T	S	S		S	S	S		S				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.		S	T	.	.	.	.	.	.	.	.	.	.	T	S	S	S						T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.														.	40	.											.	.	.	.	.	.	.	.	50	.
		68	.	70	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	R	A	A	P	A	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	W	F	T	E	D	P	G	P
Template Known Secondary structure		T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D