Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JJP2
Confidence88.88%DateWed Jul 10 14:03:07 BST 2013
Rank73Aligned Residues59
% Identity22%Templatec2e8oA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:sam domain and hd domain-containing protein 1; PDBTitle: solution structure of the n-terminal sam-domain of the sam2 domain and hd domain containing protein 1 (dendritic cell-3 derived ifng-induced protein) (dcip) (monocyte protein 5)4 (mop-5)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   487..490........ .500.........510.........520......... 530.........540...
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Query Sequence  LVSFLTGLGCPN. . CIECFTSQGLQSIYHLQNLTIEDLGALKVPD. QYRMTIWRGLQDLK
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Template Sequence  VCSFLRRGGFEEPVLLKNIRENEI. TGALLPCLDESRFENLGVSSLGERKKLLSYIQRLV
Template Known Secondary structure  T


TT
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TTTTTT

TT


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   35....40.........50........ .60.........70.........80.........90...
 
   544..
Predicted Secondary structure 
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Query Sequence  QSH
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Template Conservation     
Template Sequence  QIH
Template Known Secondary structure  TTT
Template Predicted Secondary structure 
Template SS confidence 


   94..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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