 |
| Job Description | Q9JJP2 | | Confidence | 97.98% | Date | Wed Jul 10 14:03:07 BST 2013 |
| Rank | 22 | Aligned Residues | 65 |
| % Identity | 15% | Template | c1b0xA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:protein (epha4 receptor tyrosine kinase); |
PDBTitle: the crystal structure of an eph receptor sam domain reveals2 a mechanism for modular dimerization.
|
| Resolution | 2.00 Å |
|
 |
|   |   |
481 | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | |
. | . | 530 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Y | H | A | D | P | S | L | V | S | F | L | T | G | L | G | C | P | N | C | I | E | C | F | T | S | Q | G | L | Q | S | I | Y | H | L | Q | N | L | T | I | E | D | L | G | A | L | K | V | . |
P | D | Q | Y | R | M | T | I | W | R | G | L |
| Query Conservation |   |
  |   |   |
|   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   | . |   |   |   |   |   |   |   |
|
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|
|   |   |   |   |
|
|   |
|
|
|   |
|
|
| Template Sequence |   |
F | S | A | V | V | S | V | G | D | W | L | Q | A | I | K | M | D | R | Y | K | D | N | F | T | A | A | G | Y | T | T | L | E | A | V | V | H | M | S | Q | D | D | L | A | R | I | G | I | T | A | I | T | H | Q | N | K | I | L | S | S | V |
| Template Known Secondary structure |   |
|
| S | S |
|
|  |  |  |  |  |  |  | T | T |
| G | G | G |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
540 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
| Query Sequence |   |
Q | D | L | K | Q | S |
| Query Conservation |   |
  |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|   |   |
| Template Sequence |   |
Q | A | M | R | T | Q |
| Template Known Secondary structure |   |
 |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|   |   |
970 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|