Email l.a.kelley@imperial.ac.uk Description P58006 Date Tue Jul 30 13:03:56 BST 2013 Unique Job ID ec23aefa4f8e1bc7

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2pfxa1 99.9 15 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 2 c3c1lB_ 99.9 19 PDB header:oxidoreductase Chain: B: PDB Molecule:putative antioxidant defense protein mlr4105; PDBTitle: crystal structure of an antioxidant defense protein (mlr4105) from2 mesorhizobium loti maff303099 at 2.00 a resolution 3 d2oyoa1 99.8 17 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 4 d2prra1 99.8 17 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 5 c3lvyB_ 99.8 15 PDB header:lyase Chain: B: PDB Molecule:carboxymuconolactone decarboxylase family; PDBTitle: crystal structure of carboxymuconolactone decarboxylase2 family protein smu.961 from streptococcus mutans 6 d2o4da1 99.2 17 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 7 d2ouwa1 99.0 17 Fold:AhpD-like Superfamily:AhpD-like Family:TTHA0727-like 8 d2gmya1 98.9 18 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 9 c2qeuA_ 97.8 16 PDB header:lyase Chain: A: PDB Molecule:putative carboxymuconolactone decarboxylase; PDBTitle: crystal structure of putative carboxymuconolactone decarboxylase2 (yp_555818.1) from burkholderia xenovorans lb400 at 1.65 a resolution 10 d2cwqa1 97.6 14 Fold:AhpD-like Superfamily:AhpD-like Family:TTHA0727-like 11 c3beyC_ 97.0 17 PDB header:structural genomics, unknown function Chain: C: PDB Molecule:conserved protein o27018; PDBTitle: crystal structure of the protein o27018 from methanobacterium2 thermoautotrophicum. northeast structural genomics consortium target3 tt217 12 c1p8cD_ 97.0 14 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of tm1620 (apc4843) from thermotoga2 maritima 13 c3d7iB_ 96.4 13 PDB header:lyase Chain: B: PDB Molecule:carboxymuconolactone decarboxylase family protein; PDBTitle: crystal structure of carboxymuconolactone decarboxylase family protein2 possibly involved in oxygen detoxification (1591455) from3 methanococcus jannaschii at 1.75 a resolution 14 d1vkea_ 96.1 14 Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like 15 d1vkeb_ 95.7 15 Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like 16 d2q0ta1 94.3 15 Fold:AhpD-like Superfamily:AhpD-like Family:AhpD 17 c4g9qA_ 81.5 19 PDB header:lyase Chain: A: PDB Molecule:4-carboxymuconolactone decarboxylase; PDBTitle: crystal structure of a 4-carboxymuconolactone decarboxylase 18 c2r8rB_ 58.0 25 PDB header:transferase Chain: B: PDB Molecule:sensor protein; PDBTitle: crystal structure of the n-terminal region (19..243) of sensor protein2 kdpd from pseudomonas syringae pv. tomato str. dc3000 19 d2af7a1 56.9 14 Fold:AhpD-like Superfamily:AhpD-like Family:CMD-like 20 d1knca_ 44.9 14 Fold:AhpD-like Superfamily:AhpD-like Family:AhpD 21 c1ckxA_ not modelled 37.4 40 PDB header:metal transport Chain: A: PDB Molecule:cystic fibrosis transmembrane conductance PDBTitle: cystic fibrosis transmembrane conductance regulator:2 solution structures of peptides based on the phe508 region,3 the most common site of disease-causing delta-f508 mutation 22 c2dgxA_ not modelled 27.2 17 PDB header:rna binding protein Chain: A: PDB Molecule:kiaa0430 protein; PDBTitle: solution structure of the rna recognition motif in kiaa04302 protein 23 c3ntsB_ not modelled 20.3 39 PDB header:transferase Chain: B: PDB Molecule:vsdc; PDBTitle: catalytic domain of vsdc from aeromonas hydrophila 24 c1ckwA_ not modelled 18.0 31 PDB header:metal transport Chain: A: PDB Molecule:protein (cystic fibrosis transmembrane PDBTitle: cystic fibrosis transmembrane conductance regulator:2 solution structures of peptides based on the phe508 region,3 the most common site of disease-causing delta-f508 mutation 25 c2ly8A_ not modelled 16.2 19 PDB header:chaperone Chain: A: PDB Molecule:budding yeast chaperone scm3; PDBTitle: the budding yeast chaperone scm3 recognizes the partially unfolded2 dimer of the centromere-specific cse4/h4 histone variant 26 c3c18B_ not modelled 16.2 13 PDB header:transferase Chain: B: PDB Molecule:nucleotidyltransferase-like protein; PDBTitle: crystal structure of nucleotidyltransferase-like protein2 (zp_00538802.1) from exiguobacterium sibiricum 255-15 at 1.90 a3 resolution 27 c2d9gA_ not modelled 15.7 27 PDB header:transcription Chain: A: PDB Molecule:yy1-associated factor 2; PDBTitle: solution structure of the zf-ranbp domain of yy1-associated2 factor 2 28 d1id3b_ not modelled 14.3 19 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 29 d1kx5b_ not modelled 14.2 17 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 30 d2k3ka1 not modelled 13.7 13 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 31 c2l5aA_ not modelled 12.7 18 PDB header:nuclear protein Chain: A: PDB Molecule:histone h3-like centromeric protein cse4, protein scm3, PDBTitle: structural basis for recognition of centromere specific histone h32 variant by nonhistone scm3 32 c3pgwP_ not modelled 12.6 15 PDB header:splicing/dna/rna Chain: P: PDB Molecule:u1-a; PDBTitle: crystal structure of human u1 snrnp 33 c2a3jA_ not modelled 11.9 17 PDB header:rna binding protein Chain: A: PDB Molecule:u1 small nuclear ribonucleoprotein a; PDBTitle: structure of urndesign, a complete computational redesign2 of human u1a protein 34 c3btpA_ not modelled 11.9 35 PDB header:dna binding protein, chaperone Chain: A: PDB Molecule:single-strand dna-binding protein; PDBTitle: crystal structure of agrobacterium tumefaciens vire2 in complex with2 its chaperone vire1: a novel fold and implications for dna binding 35 d1hw8c2 not modelled 10.8 24 Fold:Substrate-binding domain of HMG-CoA reductase Superfamily:Substrate-binding domain of HMG-CoA reductase Family:Substrate-binding domain of HMG-CoA reductase 36 c2pehA_ not modelled 10.6 15 PDB header:protein binding Chain: A: PDB Molecule:splicing factor 45; PDBTitle: crystal structure of the uhm domain of human spf45 in complex with2 sf3b155-ulm5 37 d1zpya1 not modelled 10.3 14 Fold:Ferritin-like Superfamily:Ferritin-like Family:half-ferritin 38 d1rg6a_ not modelled 9.7 22 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 39 d1zk8a2 not modelled 9.0 12 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 40 c3bjxB_ not modelled 8.9 16 PDB header:hydrolase Chain: B: PDB Molecule:halocarboxylic acid dehalogenase dehi; PDBTitle: structure of a group i haloacid dehalogenase from2 pseudomonas putida strain pp3 41 d1auda_ not modelled 8.8 14 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 42 c1ponB_ not modelled 8.5 38 PDB header:calcium-binding protein Chain: B: PDB Molecule:troponin c; PDBTitle: site iii-site iv troponin c heterodimer, nmr 43 d1rz4a1 not modelled 8.3 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain 44 c1zzaA_ not modelled 8.1 26 PDB header:membrane protein Chain: A: PDB Molecule:stannin; PDBTitle: solution nmr structure of the membrane protein stannin 45 d1hrti_ not modelled 8.0 35 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Leech antihemostatic proteins Family:Hirudin-like 46 c3thfA_ not modelled 7.7 27 PDB header:actin-binding protein/protein binding Chain: A: PDB Molecule:protein shroom; PDBTitle: crystal structure of the sd2 domain from drosophila shroom 47 d2huec1 not modelled 7.4 17 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 48 c3kx6C_ not modelled 7.3 35 PDB header:lyase Chain: C: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: crystal structure of fructose-1,6-bisphosphate aldolase from babesia2 bovis at 2.1a resolution 49 d4htci_ not modelled 7.1 35 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Leech antihemostatic proteins Family:Hirudin-like 50 c3k1tA_ not modelled 7.0 27 PDB header:ligase Chain: A: PDB Molecule:glutamate--cysteine ligase gsha; PDBTitle: crystal structure of putative gamma-glutamylcysteine synthetase2 (yp_546622.1) from methylobacillus flagellatus kt at 1.90 a3 resolution 51 d1wj7a1 not modelled 6.9 32 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 52 d1nu4a_ not modelled 6.5 13 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 53 c3odnA_ not modelled 6.5 15 PDB header:membrane protein Chain: A: PDB Molecule:dally-like protein; PDBTitle: the crystal structure of drosophila dally-like protein core domain 54 c1bev4_ not modelled 6.4 29 PDB header:virus Chain: 4: PDB Molecule:bovine enterovirus coat proteins vp1 to vp4; PDBTitle: bovine enterovirus vg-5-27 55 c2eapA_ not modelled 6.4 18 PDB header:signaling protein Chain: A: PDB Molecule:lymphocyte cytosolic protein 2; PDBTitle: solution structure of the n-terminal sam-domain of human2 lymphocyte cytosolic protein 2 56 c2qb0D_ not modelled 6.4 23 PDB header:hydrolase regulator Chain: D: PDB Molecule:telsam domain - lysozyme chimera; PDBTitle: structure of the 2tel crystallization module fused to t4 lysozyme with2 an ala-gly-pro linker. 57 d1jmxa2 not modelled 6.2 31 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 58 c3ol4B_ not modelled 6.2 46 PDB header:unknown function Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium smegmatis, an ortholog of rv0543c 59 d1jmsa4 not modelled 6.2 27 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:DNA polymerase beta-like 60 c1rue4_ not modelled 6.0 40 PDB header:virus Chain: 4: PDB Molecule:rhinovirus 14; PDBTitle: rhinovirus 14 site directed mutant n1219a complexed with2 antiviral compound win 52035 61 c3ajfA_ not modelled 5.8 25 PDB header:viral protein Chain: A: PDB Molecule:non-structural protein 3; PDBTitle: structural insigths into dsrna binding and rna silencing suppression2 by ns3 protein of rice hoja blanca tenuivirus 62 d1iooa_ not modelled 5.7 17 Fold:Ribonuclease Rh-like Superfamily:Ribonuclease Rh-like Family:Ribonuclease Rh-like 63 d1sxja1 not modelled 5.7 31 Fold:post-AAA+ oligomerization domain-like Superfamily:post-AAA+ oligomerization domain-like Family:DNA polymerase III clamp loader subunits, C-terminal domain 64 d1ussa_ not modelled 5.5 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Linker histone H1/H5 65 d2vana2 not modelled 5.4 9 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:DNA polymerase beta-like 66 c2krcA_ not modelled 5.2 25 PDB header:transcription Chain: A: PDB Molecule:dna-directed rna polymerase subunit delta; PDBTitle: solution structure of the n-terminal domain of bacillus2 subtilis delta subunit of rna polymerase 67 c3i3nA_ not modelled 5.1 19 PDB header:protein binding Chain: A: PDB Molecule:kelch-like protein 11; PDBTitle: crystal structure of the btb-back domains of human klhl11 68 c1hwjB_ not modelled 5.1 24 PDB header:oxidoreductase Chain: B: PDB Molecule:hmg-coa reductase; PDBTitle: complex of the catalytic portion of human hmg-coa reductase2 with cerivastatin