Return to main results Retrieve Phyre Job Id

Job DescriptionP58006
Confidence44.86%DateTue Jul 30 13:03:56 BST 2013
Rank20Aligned Residues131
% Identity14%Templated1knca_
SCOP infoAhpD-like AhpD-like AhpD
Resolution2.00
Model Dimensions (Å)X:37.679 Y:49.871 Z:31.363

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90.........100.........110.........120.........130.........140..
Predicted Secondary structure 









Query SS confidence 



























































Query Sequence  NITLVMVFHPQYLESFLKTQHYLLQMDGPLPLHYRHYIGIMAAARHQCSYLVNLHVSDFL
Query Conservation   
   
  

 

  
  
   

  




   











 
 


 
    

Alig confidence 



























.




























.
Template Conservation   
  

   
  


  

         .

     
 
 
 
 
             . 
Template Sequence  SIEKLKAALPEYAKDIKLNLSSITRSSV. LDQEQLWGTLLASAAATRNPQVLADIGAE. A
Template Known Secondary structure 
S
GGGTT
SS.S
T
.
Template Predicted Secondary structure 





.




.
Template SS confidence 



























































   2.......10.........20......... 30.........40.........50........ .
 
   143......150... ......160....
Predicted Secondary structure 




......................................




Query SS confidence 










. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .










Query Sequence  HVGGDPKWLNG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LENAPQKLQNL
Query Conservation    


  

 
......................................

 

 


 
Alig confidence 










......................................










Template Conservation     

     

  


 





 

   
         
 



  
  


    

Template Sequence  TDHLSAAARHAALGAAAIMGMNNVFYRGRGFLEGRYDDLRPGLRMNIIANPGIPKANFEL
Template Known Secondary structure  TTT

TTTTTTTS







SS
Template Predicted Secondary structure 























Template SS confidence 



























































   60.........70.........80.........90.........100.........110.........
 
   165....170.........180.........190.........200.........210........
Predicted Secondary structure 















Query SS confidence 





















































Query Sequence  GELNKVLAHRPWLITKEHIEGLLKAEEHSWSLAELVHAVVLLTHYHSLASFTFG
Query Conservation    






 

 
 
  
  


     


 





 



 


 


 
Alig confidence 

























...
























Template Conservation 





  


  

  
   
   
... 
 


 







  
   

 
Template Sequence  WSFAVSAINGCSHCLVAHEHTLRTVG. . . VDREAIFEALKAAAIVSGVAQALAT
Template Known Secondary structure  T
TT...

Template Predicted Secondary structure 




...

Template SS confidence 





















































   120.........130.........140..... ....150.........160.........170
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D