Return to main results Retrieve Phyre Job Id

Job DescriptionP58006
Confidence81.49%DateTue Jul 30 13:03:56 BST 2013
Rank17Aligned Residues143
% Identity19%Templatec4g9qA_
PDB info PDB header:lyaseChain: A: PDB Molecule:4-carboxymuconolactone decarboxylase; PDBTitle: crystal structure of a 4-carboxymuconolactone decarboxylase
Resolution1.77 Å
Model Dimensions (Å)X:46.233 Y:44.441 Z:33.476

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100 .........110.........120.........130.......
Predicted Secondary structure 



.








Query SS confidence 





















.




































Query Sequence  GRLDNITLVMVFHPQYLESFLK. TQHYLLQMDGPLPLHYRHYIGIMAAARHQCSYLVNLH
Query Conservation 


  
   
  

 

  
  .
   

  




   











 
 


 
 
Alig confidence 





















.









.

























Template Conservation          
    
 
         


     .

 
 
 

 

 
 
 
    
  
Template Sequence  GRRFSPDQVRSVAPALEQYTQQRLYGDVWQRPG. LNRRDRSLVTIAALIARGEAPALTYY
Template Known Secondary structure  GSSS
TT
TTTTTGGG
TT.S
TT
GGG
Template Predicted Secondary structure 










.




Template SS confidence 



























































   16...20.........30.........40........ .50.........60.........70....
 
   138.140.........150...
Predicted Secondary structure 




............................................
Query SS confidence 















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  VSDFLHVGGDPKWLNG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation     

  


  

 
............................................
Alig confidence 















............................................
Template Conservation     

  
 
  

 
 
   
 
 
 
 
  
      
  
 
               
Template Sequence  ADQALENGVKPSEISETITHLAYYSGWGKAXATVGPVSEAFAKRGIGQDQLAAVESTPLP
Template Known Secondary structure  TT

T
TTTT

GGGS

SS




Template Predicted Secondary structure 























Template SS confidence 



























































   75....80.........90.........100.........110.........120.........130....
 
   154.....160.........170.....
Predicted Secondary structure  ......................................








Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .





















Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LENAPQKLQNLGELNKVLAHRP
Query Conservation  ......................................

 

 


 
  






 
Alig confidence  ......................................





















Template Conservation                       
           
 
  
  

 
 



 

 
 
 
 
Template Sequence  LDEEAEAQRATTVGNQFGSVAPGLVQYTTDYLFRDLWLRPDLAPRDRSLVTIAALISVGQ
Template Known Secondary structure 

TTT
TTTTGGG
TTS
TT
Template Predicted Secondary structure 

















Template SS confidence 



























































   135....140.........150.........160.........170.........180.........190....
 
   176...180.........190.........200.........210.........220.....
Predicted Secondary structure 


















Query SS confidence 

















































Query Sequence  WLITKEHIEGLLKAEEHSWSLAELVHAVVLLTHYHSLASFTFGCGISPEI
Query Conservation 
 
 
  
  


     


 





 



 


 


 



  

Alig confidence 














...































Template Conservation     
  
   

  
... 
 


 
 
     
 
 
    
      
Template Sequence  VEQITFHLNKALDNG. . . LSEEQAAEVITHLAFYAGWPNAXSALPVAKAV
Template Known Secondary structure  GGGTT...


Template Predicted Secondary structure 

...



Template SS confidence 

















































   195....200......... 210.........220.........230.........240.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D