 |
| Job Description | P58006 | | Confidence | 4.59% | Date | Tue Jul 30 13:03:56 BST 2013 |
| Rank | 90 | Aligned Residues | 35 |
| % Identity | 29% | Template | c3ty8A_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:polynucleotide 2',3'-cyclic phosphate phosphodiesterase / |
PDBTitle: crystal structure of c. thermocellum pnkp ligase domain apo form
|
| Resolution | 2.60 Å |
|
|   |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | A | H | R | P | W | L | I | T | K | E | H | I | E | G | L | L | K | A | E | E | H | S | W | S | L | A | E | L | V | H | A | V | V | L | L |
| Query Conservation |   |
|
|
|   |
|
|   |
|   |
|   |   |
|   |   |
|
|
|   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|   |
|
|
|   |
|   |
|
|
|   |   |   |
| . |
|
|
|   |
|
|
|
|   |
|
|   |
|
|
|
|
| Template Sequence |   |
L | A | L | R | E | F | S | L | G | M | E | A | L | E | R | F | V | R | N | . |
E | P | L | Y | R | V | H | E | C | V | F | G | V | L | A | L |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
827 | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | |
. | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|