Email l.a.kelley@imperial.ac.uk Description P59048 Date Wed Jul 10 14:04:54 BST 2013 Unique Job ID eba552cc3c21b6c7

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2zdiC_ 96.6 15 PDB header:chaperone Chain: C: PDB Molecule:prefoldin subunit alpha; PDBTitle: crystal structure of prefoldin from pyrococcus horikoshii2 ot3 2 d1fxkc_ 96.3 15 Fold:Long alpha-hairpin Superfamily:Prefoldin Family:Prefoldin 3 c2zdiA_ 96.0 14 PDB header:chaperone Chain: A: PDB Molecule:prefoldin subunit beta; PDBTitle: crystal structure of prefoldin from pyrococcus horikoshii2 ot3 4 d1fxka_ 85.3 19 Fold:Long alpha-hairpin Superfamily:Prefoldin Family:Prefoldin 5 c3aeiA_ 69.8 18 PDB header:chaperone Chain: A: PDB Molecule:prefoldin beta subunit 2; PDBTitle: crystal structure of the prefoldin beta2 subunit from thermococcus2 strain ks-1 6 c1go4F_ 51.8 26 PDB header:cell cycle Chain: F: PDB Molecule:mad1 (mitotic arrest deficient)-like 1; PDBTitle: crystal structure of mad1-mad2 reveals a conserved mad22 binding motif in mad1 and cdc20. 7 c2ke4A_ 41.5 22 PDB header:membrane protein Chain: A: PDB Molecule:cdc42-interacting protein 4; PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4 8 c2gboB_ 27.5 14 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:upf0358 protein ef2458; PDBTitle: protein of unknown function ef2458 from enterococcus faecalis 9 d2gboa1 27.5 14 Fold:Open three-helical up-and-down bundle Superfamily:EF2458-like Family:EF2458-like 10 c4dncD_ 20.0 33 PDB header:transcription Chain: D: PDB Molecule:male-specific lethal 1 homolog; PDBTitle: crystal structure of human mof in complex with msl1 11 c3lyvF_ 18.6 27 PDB header:chaperone Chain: F: PDB Molecule:ribosome-associated factor y; PDBTitle: crystal structure of a domain of ribosome-associated factor y from2 streptococcus pyogenes serotype m6. northeast structural genomics3 consortium target id dr64a 12 c3ka5A_ 16.4 38 PDB header:chaperone Chain: A: PDB Molecule:ribosome-associated protein y (psrp-1); PDBTitle: crystal structure of ribosome-associated protein y (psrp-1)2 from clostridium acetobutylicum. northeast structural3 genomics consortium target id car123a 13 d1wpga2 16.3 18 Fold:HAD-like Superfamily:HAD-like Family:Meta-cation ATPase, catalytic domain P 14 c3hdeA_ 15.5 22 PDB header:hydrolase Chain: A: PDB Molecule:lysozyme; PDBTitle: crystal structure of full-length endolysin r21 from phage 21 15 c3he4A_ 14.5 32 PDB header:de novo protein Chain: A: PDB Molecule:synzip6; PDBTitle: heterospecific coiled-coil pair synzip5:synzip6 16 d1lpya_ 13.9 14 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme 17 c2kz6A_ 13.8 30 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of protein cv0426 from chromobacterium violaceum,2 northeast structural genomics consortium (nesg) target cvt2 18 c3kyzA_ 13.1 27 PDB header:transferase Chain: A: PDB Molecule:sensor protein pfes; PDBTitle: the crystal structure of the sensor domain of two-component2 sensor pfes from pseudomonas aeruginosa pa01 19 d176la_ 12.5 19 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme 20 c1t3jA_ 12.2 20 PDB header:membrane protein Chain: A: PDB Molecule:mitofusin 1; PDBTitle: mitofusin domain hr2 v686m/i708m mutant 21 d1p37a_ not modelled 12.2 21 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme 22 c3b8cB_ not modelled 11.6 26 PDB header:hydrolase Chain: B: PDB Molecule:atpase 2, plasma membrane-type; PDBTitle: crystal structure of a plasma membrane proton pump 23 c1mhsA_ not modelled 11.5 15 PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase 24 c2y0mB_ not modelled 11.0 35 PDB header:transcription Chain: B: PDB Molecule:male-specific lethal 1 homolog; PDBTitle: crystal structure of the complex between dosage2 compensation factors msl1 and mof 25 c3rkgA_ not modelled 10.8 11 PDB header:metal transport Chain: A: PDB Molecule:magnesium transporter mrs2, mitochondrial; PDBTitle: structural and functional characterization of the yeast mg2+ channel2 mrs2 26 c2ka6B_ not modelled 10.4 41 PDB header:transcription regulator Chain: B: PDB Molecule:signal transducer and activator of transcription PDBTitle: nmr structure of the cbp-taz2/stat1-tad complex 27 d1hqz1_ not modelled 9.8 10 Fold:Gelsolin-like Superfamily:Actin depolymerizing proteins Family:Cofilin-like 28 d1hh8a_ not modelled 9.7 12 Fold:alpha-alpha superhelix Superfamily:TPR-like Family:Tetratricopeptide repeat (TPR) 29 d1oqya1 not modelled 9.7 26 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 30 c2ykqC_ not modelled 9.5 13 PDB header:rna-binding protein Chain: C: PDB Molecule:line-1 orf1p; PDBTitle: structure of the human line-1 orf1p trimer 31 c3hdfA_ not modelled 9.1 22 PDB header:hydrolase Chain: A: PDB Molecule:lysozyme; PDBTitle: crystal structure of truncated endolysin r21 from phage 21 32 c2anxB_ not modelled 8.7 19 PDB header:hydrolase Chain: B: PDB Molecule:lysozyme; PDBTitle: crystal structure of bacteriophage p22 lysozyme mutant l87m 33 c1y4mC_ not modelled 8.7 33 PDB header:membrane protein Chain: C: PDB Molecule:herv-frd_6p24.1 provirus ancestral env polyprotein; PDBTitle: crystal structure of human endogenous retrovirus herv-frd envelope2 protein (syncitin-2) 34 c2ko2A_ not modelled 8.4 15 PDB header:membrane protein Chain: A: PDB Molecule:reticulon-4; PDBTitle: nogo66 35 d1xjta_ not modelled 8.3 12 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme 36 c1mofA_ not modelled 8.3 24 PDB header:viral protein Chain: A: PDB Molecule:moloney murine leukemia virus p15; PDBTitle: coat protein 37 c2l5gB_ not modelled 8.0 18 PDB header:transcription regulator Chain: B: PDB Molecule:putative uncharacterized protein ncor2; PDBTitle: co-ordinates and 1h, 13c and 15n chemical shift assignments for the2 complex of gps2 53-90 and smrt 167-207 38 c1lb1C_ not modelled 7.9 13 PDB header:signaling protein Chain: C: PDB Molecule:guanine nucleotide exchange factor dbs; PDBTitle: crystal structure of the dbl and pleckstrin homology2 domains of dbs in complex with rhoa 39 d2a8ea1 not modelled 7.4 20 Fold:YktB/PF0168-like Superfamily:YktB/PF0168-like Family:YktB-like 40 c2odmA_ not modelled 7.4 15 PDB header:unknown function Chain: A: PDB Molecule:upf0358 protein mw0995; PDBTitle: crystal structure of s. aureus ylan, an essential leucine rich protein2 involved in the control of cell shape 41 d1zl8a1 not modelled 7.3 16 Fold:L27 domain Superfamily:L27 domain Family:L27 domain 42 d2b8ea1 not modelled 7.3 22 Fold:HAD-like Superfamily:HAD-like Family:Meta-cation ATPase, catalytic domain P 43 d1ubea2 not modelled 7.2 3 Fold:Anti-LPS factor/recA domain Superfamily:RecA protein, C-terminal domain Family:RecA protein, C-terminal domain 44 c2l3aA_ not modelled 7.2 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of homodimer protein sp_0782 (7-79) from2 streptococcus pneumoniae northeast structural genomics consortium3 target spr104 . 45 d1mo6a2 not modelled 7.2 5 Fold:Anti-LPS factor/recA domain Superfamily:RecA protein, C-terminal domain Family:RecA protein, C-terminal domain 46 c1a3wB_ not modelled 7.1 24 PDB header:transferase Chain: B: PDB Molecule:pyruvate kinase; PDBTitle: pyruvate kinase from saccharomyces cerevisiae complexed with fbp, pg,2 mn2+ and k+ 47 d1xp8a2 not modelled 6.9 18 Fold:Anti-LPS factor/recA domain Superfamily:RecA protein, C-terminal domain Family:RecA protein, C-terminal domain 48 d189la_ not modelled 6.8 21 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme 49 c3virA_ not modelled 6.8 14 PDB header:recombination activator Chain: A: PDB Molecule:mating-type switching protein swi5; PDBTitle: crystal strcture of swi5 from fission yeast 50 c2q7cC_ not modelled 6.8 25 PDB header:viral protein Chain: C: PDB Molecule:fusion protein between yeast variant gcn4 and PDBTitle: crystal structure of iqn17 51 c3t07D_ not modelled 6.8 26 PDB header:transferase/transferase inhibitor Chain: D: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of s. aureus pyruvate kinase in complex with a2 naturally occurring bis-indole alkaloid 52 c4exmB_ not modelled 6.8 17 PDB header:toxin, hydrolase Chain: B: PDB Molecule:pesticin, lysozyme chimera; PDBTitle: the crystal structure of an engineered phage lysin containing the2 binding domain of pesticin and the killing domain of t4-lysozyme 53 c1d6uB_ not modelled 6.6 47 PDB header:oxidoreductase Chain: B: PDB Molecule:copper amine oxidase; PDBTitle: crystal structure of e. coli amine oxidase anaerobically reduced with2 beta-phenylethylamine 54 d1y74a1 not modelled 6.6 13 Fold:L27 domain Superfamily:L27 domain Family:L27 domain 55 c3uuxD_ not modelled 6.4 15 PDB header:apoptosis Chain: D: PDB Molecule:mitochondrial division protein 1; PDBTitle: crystal structure of yeast fis1 in complex with mdv1 fragment2 containing n-terminal extension and coiled coil domains 56 d1u94a2 not modelled 6.3 10 Fold:Anti-LPS factor/recA domain Superfamily:RecA protein, C-terminal domain Family:RecA protein, C-terminal domain 57 d1udma_ not modelled 6.3 21 Fold:Gelsolin-like Superfamily:Actin depolymerizing proteins Family:Cofilin-like 58 d1is1a_ not modelled 6.2 13 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 59 d2j0111 not modelled 6.1 44 Fold:L28p-like Superfamily:L28p-like Family:Ribosomal protein L28 60 d1vdra_ not modelled 6.0 16 Fold:Dihydrofolate reductase-like Superfamily:Dihydrofolate reductase-like Family:Dihydrofolate reductases 61 d191la_ not modelled 5.9 21 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme 62 c2w9yA_ not modelled 5.8 18 PDB header:lipid transport Chain: A: PDB Molecule:fatty acid/retinol binding protein protein 7, PDBTitle: the structure of the lipid binding protein ce-far-7 from2 caenorhabditis elegans 63 c3tnuB_ not modelled 5.7 12 PDB header:cytosolic protein Chain: B: PDB Molecule:keratin, type ii cytoskeletal 5; PDBTitle: heterocomplex of coil 2b domains of human intermediate filament2 proteins, keratin 5 (krt5) and keratin 14 (krt14) 64 c3b9bA_ not modelled 5.6 15 PDB header:hydrolase Chain: A: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: structure of the e2 beryllium fluoride complex of the serca2 ca2+-atpase 65 c2la3A_ not modelled 5.5 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the nmr structure of the protein np_344798.1 reveals a cca-adding2 enzyme head domain 66 d1vega_ not modelled 5.5 17 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 67 c1b89A_ not modelled 5.5 20 PDB header:clathrin Chain: A: PDB Molecule:protein (clathrin heavy chain); PDBTitle: clathrin heavy chain proximal leg segment (bovine) 68 d1b89a_ not modelled 5.5 20 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:Clathrin heavy chain proximal leg segment 69 c3mqzA_ not modelled 5.5 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized conserved protein duf1054; PDBTitle: crystal structure of conserved protein duf1054 from pink subaerial2 biofilm microbial leptospirillum sp. group ii uba. 70 c3ma8A_ not modelled 5.3 24 PDB header:transferase Chain: A: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of cgd1_2040, a pyruvate kinase from cryptosporidium2 parvum 71 d1ifya_ not modelled 5.3 26 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 72 c4aj5M_ not modelled 5.3 9 PDB header:cell cycle Chain: M: PDB Molecule:spindle and kinetochore-associated protein 2; PDBTitle: crystal structure of the ska core complex 73 c2ivfB_ not modelled 5.2 20 PDB header:oxidoreductase Chain: B: PDB Molecule:ethylbenzene dehydrogenase beta-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum