Job Description P59048 Confidence 8.66% Date Wed Jul 10 14:04:54 BST 2013 Rank 33 Aligned Residues 33 % Identity 33% Template c1y4mC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:herv-frd_6p24.1 provirus ancestral env polyprotein; PDBTitle: crystal structure of human endogenous retrovirus herv-frd envelope2 protein (syncitin-2) Resolution 1.60 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	E	E	L	A	E	A	V	L	S	D	K	R	Q	I	V	D	L	D	T	K	R	N	Q	N	R	E	G	L	R	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	D	T	M	A	K	A	L	T	T	M	Q	E	Q	I	D	S	L	A	A	V	V	L	Q	N	R	R	G	L	D	M	L
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D