Phyre 2 Results for P59048

Email | l.a.kelley@imperial.ac.uk
Description | P59048
Date | Wed Jul 10 14:04:54 BST 2013
Unique Job ID | eba552cc3c21b6c7

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2zdiC_ |
|  | 96.6 | 15 | PDB header:chaperone Chain: C: PDB Molecule:prefoldin subunit alpha; PDBTitle: crystal structure of prefoldin from pyrococcus horikoshii2 ot3
2 | d1fxkc_ |
|  | 96.3 | 15 | Fold:Long alpha-hairpin Superfamily:Prefoldin Family:Prefoldin
3 | c2zdiA_ |
|  | 96.0 | 14 | PDB header:chaperone Chain: A: PDB Molecule:prefoldin subunit beta; PDBTitle: crystal structure of prefoldin from pyrococcus horikoshii2 ot3
4 | d1fxka_ |
|  | 85.3 | 19 | Fold:Long alpha-hairpin Superfamily:Prefoldin Family:Prefoldin
5 | c3aeiA_ |
|  | 69.8 | 18 | PDB header:chaperone Chain: A: PDB Molecule:prefoldin beta subunit 2; PDBTitle: crystal structure of the prefoldin beta2 subunit from thermococcus2 strain ks-1
6 | c1go4F_ |
|  | 51.8 | 26 | PDB header:cell cycle Chain: F: PDB Molecule:mad1 (mitotic arrest deficient)-like 1; PDBTitle: crystal structure of mad1-mad2 reveals a conserved mad22 binding motif in mad1 and cdc20.
7 | c2ke4A_ |
|  | 41.5 | 22 | PDB header:membrane protein Chain: A: PDB Molecule:cdc42-interacting protein 4; PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4
8 | c2gboB_ |
|  | 27.5 | 14 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:upf0358 protein ef2458; PDBTitle: protein of unknown function ef2458 from enterococcus faecalis
9 | d2gboa1 |
|  | 27.5 | 14 | Fold:Open three-helical up-and-down bundle Superfamily:EF2458-like Family:EF2458-like
10 | c4dncD_ |
|  | 20.0 | 33 | PDB header:transcription Chain: D: PDB Molecule:male-specific lethal 1 homolog; PDBTitle: crystal structure of human mof in complex with msl1
11 | c3lyvF_ |
|  | 18.6 | 27 | PDB header:chaperone Chain: F: PDB Molecule:ribosome-associated factor y; PDBTitle: crystal structure of a domain of ribosome-associated factor y from2 streptococcus pyogenes serotype m6. northeast structural genomics3 consortium target id dr64a
12 | c3ka5A_ |
|  | 16.4 | 38 | PDB header:chaperone Chain: A: PDB Molecule:ribosome-associated protein y (psrp-1); PDBTitle: crystal structure of ribosome-associated protein y (psrp-1)2 from clostridium acetobutylicum. northeast structural3 genomics consortium target id car123a
13 | d1wpga2 |
|  | 16.3 | 18 | Fold:HAD-like Superfamily:HAD-like Family:Meta-cation ATPase, catalytic domain P
14 | c3hdeA_ |
|  | 15.5 | 22 | PDB header:hydrolase Chain: A: PDB Molecule:lysozyme; PDBTitle: crystal structure of full-length endolysin r21 from phage 21
15 | c3he4A_ |
|  | 14.5 | 32 | PDB header:de novo protein Chain: A: PDB Molecule:synzip6; PDBTitle: heterospecific coiled-coil pair synzip5:synzip6
16 | d1lpya_ |
|  | 13.9 | 14 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme
17 | c2kz6A_ |
|  | 13.8 | 30 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of protein cv0426 from chromobacterium violaceum,2 northeast structural genomics consortium (nesg) target cvt2
18 | c3kyzA_ |
|  | 13.1 | 27 | PDB header:transferase Chain: A: PDB Molecule:sensor protein pfes; PDBTitle: the crystal structure of the sensor domain of two-component2 sensor pfes from pseudomonas aeruginosa pa01
19 | d176la_ |
|  | 12.5 | 19 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme
20 | c1t3jA_ |
|  | 12.2 | 20 | PDB header:membrane protein Chain: A: PDB Molecule:mitofusin 1; PDBTitle: mitofusin domain hr2 v686m/i708m mutant
21 | d1p37a_ |
| not modelled | 12.2 | 21 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme
22 | c3b8cB_ |
| not modelled | 11.6 | 26 | PDB header:hydrolase Chain: B: PDB Molecule:atpase 2, plasma membrane-type; PDBTitle: crystal structure of a plasma membrane proton pump
23 | c1mhsA_ |
| not modelled | 11.5 | 15 | PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase
24 | c2y0mB_ |
| not modelled | 11.0 | 35 | PDB header:transcription Chain: B: PDB Molecule:male-specific lethal 1 homolog; PDBTitle: crystal structure of the complex between dosage2 compensation factors msl1 and mof
25 | c3rkgA_ |
| not modelled | 10.8 | 11 | PDB header:metal transport Chain: A: PDB Molecule:magnesium transporter mrs2, mitochondrial; PDBTitle: structural and functional characterization of the yeast mg2+ channel2 mrs2
26 | c2ka6B_ |
| not modelled | 10.4 | 41 | PDB header:transcription regulator Chain: B: PDB Molecule:signal transducer and activator of transcription PDBTitle: nmr structure of the cbp-taz2/stat1-tad complex
27 | d1hqz1_ |
| not modelled | 9.8 | 10 | Fold:Gelsolin-like Superfamily:Actin depolymerizing proteins Family:Cofilin-like
28 | d1hh8a_ |
| not modelled | 9.7 | 12 | Fold:alpha-alpha superhelix Superfamily:TPR-like Family:Tetratricopeptide repeat (TPR)
29 | d1oqya1 |
| not modelled | 9.7 | 26 | Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain
30 | c2ykqC_ |
| not modelled | 9.5 | 13 | PDB header:rna-binding protein Chain: C: PDB Molecule:line-1 orf1p; PDBTitle: structure of the human line-1 orf1p trimer
31 | c3hdfA_ |
| not modelled | 9.1 | 22 | PDB header:hydrolase Chain: A: PDB Molecule:lysozyme; PDBTitle: crystal structure of truncated endolysin r21 from phage 21
32 | c2anxB_ |
| not modelled | 8.7 | 19 | PDB header:hydrolase Chain: B: PDB Molecule:lysozyme; PDBTitle: crystal structure of bacteriophage p22 lysozyme mutant l87m
33 | c1y4mC_ |
| not modelled | 8.7 | 33 | PDB header:membrane protein Chain: C: PDB Molecule:herv-frd_6p24.1 provirus ancestral env polyprotein; PDBTitle: crystal structure of human endogenous retrovirus herv-frd envelope2 protein (syncitin-2)
34 | c2ko2A_ |
| not modelled | 8.4 | 15 | PDB header:membrane protein Chain: A: PDB Molecule:reticulon-4; PDBTitle: nogo66
35 | d1xjta_ |
| not modelled | 8.3 | 12 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme
36 | c1mofA_ |
| not modelled | 8.3 | 24 | PDB header:viral protein Chain: A: PDB Molecule:moloney murine leukemia virus p15; PDBTitle: coat protein
37 | c2l5gB_ |
| not modelled | 8.0 | 18 | PDB header:transcription regulator Chain: B: PDB Molecule:putative uncharacterized protein ncor2; PDBTitle: co-ordinates and 1h, 13c and 15n chemical shift assignments for the2 complex of gps2 53-90 and smrt 167-207
38 | c1lb1C_ |
| not modelled | 7.9 | 13 | PDB header:signaling protein Chain: C: PDB Molecule:guanine nucleotide exchange factor dbs; PDBTitle: crystal structure of the dbl and pleckstrin homology2 domains of dbs in complex with rhoa
39 | d2a8ea1 |
| not modelled | 7.4 | 20 | Fold:YktB/PF0168-like Superfamily:YktB/PF0168-like Family:YktB-like
40 | c2odmA_ |
| not modelled | 7.4 | 15 | PDB header:unknown function Chain: A: PDB Molecule:upf0358 protein mw0995; PDBTitle: crystal structure of s. aureus ylan, an essential leucine rich protein2 involved in the control of cell shape
41 | d1zl8a1 |
| not modelled | 7.3 | 16 | Fold:L27 domain Superfamily:L27 domain Family:L27 domain
42 | d2b8ea1 |
| not modelled | 7.3 | 22 | Fold:HAD-like Superfamily:HAD-like Family:Meta-cation ATPase, catalytic domain P
43 | d1ubea2 |
| not modelled | 7.2 | 3 | Fold:Anti-LPS factor/recA domain Superfamily:RecA protein, C-terminal domain Family:RecA protein, C-terminal domain
44 | c2l3aA_ |
| not modelled | 7.2 | 33 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of homodimer protein sp_0782 (7-79) from2 streptococcus pneumoniae northeast structural genomics consortium3 target spr104 .
45 | d1mo6a2 |
| not modelled | 7.2 | 5 | Fold:Anti-LPS factor/recA domain Superfamily:RecA protein, C-terminal domain Family:RecA protein, C-terminal domain
46 | c1a3wB_ |
| not modelled | 7.1 | 24 | PDB header:transferase Chain: B: PDB Molecule:pyruvate kinase; PDBTitle: pyruvate kinase from saccharomyces cerevisiae complexed with fbp, pg,2 mn2+ and k+
47 | d1xp8a2 |
| not modelled | 6.9 | 18 | Fold:Anti-LPS factor/recA domain Superfamily:RecA protein, C-terminal domain Family:RecA protein, C-terminal domain
48 | d189la_ |
| not modelled | 6.8 | 21 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme
49 | c3virA_ |
| not modelled | 6.8 | 14 | PDB header:recombination activator Chain: A: PDB Molecule:mating-type switching protein swi5; PDBTitle: crystal strcture of swi5 from fission yeast
50 | c2q7cC_ |
| not modelled | 6.8 | 25 | PDB header:viral protein Chain: C: PDB Molecule:fusion protein between yeast variant gcn4 and PDBTitle: crystal structure of iqn17
51 | c3t07D_ |
| not modelled | 6.8 | 26 | PDB header:transferase/transferase inhibitor Chain: D: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of s. aureus pyruvate kinase in complex with a2 naturally occurring bis-indole alkaloid
52 | c4exmB_ |
| not modelled | 6.8 | 17 | PDB header:toxin, hydrolase Chain: B: PDB Molecule:pesticin, lysozyme chimera; PDBTitle: the crystal structure of an engineered phage lysin containing the2 binding domain of pesticin and the killing domain of t4-lysozyme
53 | c1d6uB_ |
| not modelled | 6.6 | 47 | PDB header:oxidoreductase Chain: B: PDB Molecule:copper amine oxidase; PDBTitle: crystal structure of e. coli amine oxidase anaerobically reduced with2 beta-phenylethylamine
54 | d1y74a1 |
| not modelled | 6.6 | 13 | Fold:L27 domain Superfamily:L27 domain Family:L27 domain
55 | c3uuxD_ |
| not modelled | 6.4 | 15 | PDB header:apoptosis Chain: D: PDB Molecule:mitochondrial division protein 1; PDBTitle: crystal structure of yeast fis1 in complex with mdv1 fragment2 containing n-terminal extension and coiled coil domains
56 | d1u94a2 |
| not modelled | 6.3 | 10 | Fold:Anti-LPS factor/recA domain Superfamily:RecA protein, C-terminal domain Family:RecA protein, C-terminal domain
57 | d1udma_ |
| not modelled | 6.3 | 21 | Fold:Gelsolin-like Superfamily:Actin depolymerizing proteins Family:Cofilin-like
58 | d1is1a_ |
| not modelled | 6.2 | 13 | Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF
59 | d2j0111 |
| not modelled | 6.1 | 44 | Fold:L28p-like Superfamily:L28p-like Family:Ribosomal protein L28
60 | d1vdra_ |
| not modelled | 6.0 | 16 | Fold:Dihydrofolate reductase-like Superfamily:Dihydrofolate reductase-like Family:Dihydrofolate reductases
61 | d191la_ |
| not modelled | 5.9 | 21 | Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Phage lysozyme
62 | c2w9yA_ |
| not modelled | 5.8 | 18 | PDB header:lipid transport Chain: A: PDB Molecule:fatty acid/retinol binding protein protein 7, PDBTitle: the structure of the lipid binding protein ce-far-7 from2 caenorhabditis elegans
63 | c3tnuB_ |
| not modelled | 5.7 | 12 | PDB header:cytosolic protein Chain: B: PDB Molecule:keratin, type ii cytoskeletal 5; PDBTitle: heterocomplex of coil 2b domains of human intermediate filament2 proteins, keratin 5 (krt5) and keratin 14 (krt14)
64 | c3b9bA_ |
| not modelled | 5.6 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: structure of the e2 beryllium fluoride complex of the serca2 ca2+-atpase
65 | c2la3A_ |
| not modelled | 5.5 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the nmr structure of the protein np_344798.1 reveals a cca-adding2 enzyme head domain
66 | d1vega_ |
| not modelled | 5.5 | 17 | Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain
67 | c1b89A_ |
| not modelled | 5.5 | 20 | PDB header:clathrin Chain: A: PDB Molecule:protein (clathrin heavy chain); PDBTitle: clathrin heavy chain proximal leg segment (bovine)
68 | d1b89a_ |
| not modelled | 5.5 | 20 | Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:Clathrin heavy chain proximal leg segment
69 | c3mqzA_ |
| not modelled | 5.5 | 7 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized conserved protein duf1054; PDBTitle: crystal structure of conserved protein duf1054 from pink subaerial2 biofilm microbial leptospirillum sp. group ii uba.
70 | c3ma8A_ |
| not modelled | 5.3 | 24 | PDB header:transferase Chain: A: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of cgd1_2040, a pyruvate kinase from cryptosporidium2 parvum
71 | d1ifya_ |
| not modelled | 5.3 | 26 | Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain
72 | c4aj5M_ |
| not modelled | 5.3 | 9 | PDB header:cell cycle Chain: M: PDB Molecule:spindle and kinetochore-associated protein 2; PDBTitle: crystal structure of the ska core complex
73 | c2ivfB_ |
| not modelled | 5.2 | 20 | PDB header:oxidoreductase Chain: B: PDB Molecule:ethylbenzene dehydrogenase beta-subunit; PDBTitle: ethylbenzene dehydrogenase from aromatoleum aromaticum