Phyre 2 alignment of P59048 with c3b8cB_

Return to main results | Retrieve Phyre Job Id

Job Description | P59048
Confidence | 11.60% | Date | Wed Jul 10 14:04:54 BST 2013
Rank | 22 | Aligned Residues | 27
% Identity | 26% | Template | c3b8cB_
PDB info | PDB header:hydrolase | Chain: B: PDB Molecule:atpase 2, plasma membrane-type; | PDBTitle: crystal structure of a plasma membrane proton pump
Resolution | 3.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | T | K | R | N | Q | N | R | E | G | L | R | A | L | Q | K | D | L | S | V | S | E | D | V | M | V | C | F | G | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |
Template Sequence |  | D | P | P | R | H | D | S | A | E | T | I | R | R | A | L | N | L | G | V | . | . | . | N | V | K | M | I | T | G | D
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  | . | . | . |  |  |  |  |  |  | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 487 | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . |  |  |  | . | . | . | . | 510 | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions
| Phyre2 is part of Genome3D |