Phyre 2 alignment of P59048 with d176la_

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Job Description | P59048
Confidence | 12.51% | Date | Wed Jul 10 14:04:54 BST 2013
Rank | 19 | Aligned Residues | 42
% Identity | 19% | Template | d176la_
SCOP info | Lysozyme-like | Lysozyme-like | Phage lysozyme
Resolution | 2.20
Model Dimensions (Å) | X:32.580 Y:27.829 Z:23.456

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 49 | 50 | . | . | . | . | . | . | . | . |  | . | 60 | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | D | L | S | V | S | E | D | V | M | . | V | C | F | G | N | M | F | I | K | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | M | P | H | P | K | T | K | E | M | I | Q | K | D | Q | E | H | L | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | I | Y | K | D | T | E | G | Y | Y | T | I | G | I | G | H | T | L | K | V | D | G | N | S | N | A | A | K | S | E | L | D | K | A | I | G | R | N | T | N | G | V | I | T | K | D | E | A | E | K | L | F | N | Q | D | V | D | A | A | V
Template Known Secondary structure |  |  |  |  |  |  | T | T | S |  |  |  |  |  | T | T |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  | T | T | B |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | .
|  | 86 | . | . | . | 90
Predicted Secondary structure |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |
Query Sequence |  | K | E | I | E | R
Query Conservation |  |  |  |  |  |
Alig confidence |  |  |  |  |  |
Template Conservation |  |  |  |  |  |
Template Sequence |  | R | G | I | L | R
Template Known Secondary structure |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |
|  | 76 | . | . | . | 80

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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