Job Description Q62415 Confidence 58.21% Date Tue Jul 30 13:16:45 BST 2013 Rank 382 Aligned Residues 288 % Identity 9% Template c4jioA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:bro1; PDBTitle: bro1 v domain and ubiquitin Resolution 3.60 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	V	P	I	T	P	E	T	T	C	R	D	V	V	E	F	C	K	E	P	G	E	G	G	C	H	L	A	E	V	W	R	G	S	E	R	P	I	P	Y	D	H	M	M	Y	E	H	L	Q	K	W	G	P	R	R	E	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	E	I	Y	E	K	E	S	I	Y	S	E	E	K	A	Q	L	L	R	K	E	X	E	S	V	E	T	A	D	L	E	Y	T	S	F	V	E	F	T	N	L	P	K	L	I	N	D	L	A	A	A	Y	T	P	Q	L	E	X	X
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	F	L	R	H	E	D	S	P	T	E	S	S	E	Q	G	A	R	Q	T	Q	E	Q	R	T	Q	R	S	V	V	N	V	P	G	E	K	R	T	E	N	G	V	G	N	P	R	V	E	L	T	L	S	E	L	Q	D	M	A	A
Query Conservation
Alig confidence																		.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		R	D	Q	I	K	S	W	A	Y	A	V	Q	Q	N	E	F	.	.	.	.	.	N	D	I	E	R	I	I	N	V	I	S	S	K	R	K	E	I	L	D	I	L	A	L	P	A	E	E	K	E	N	I	L	K	L	K	A	S	L	V
Template Known Secondary structure															S	T	T	.	.	.	.	.	T	T	T		T																					S	T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.						.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		R	Q	Q	Q	Q	I	E	N	Q	Q	Q	M	L	V	A	K	E	Q	R	L	H	F	L	K	Q	Q	E	R	R	Q	Q	Q	S	V	S	E	N	.	E	K	L	Q	K	L	K	E	R	V	E	A	Q	E	N	K	L	K	K	I	R	A
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		E	A	S	Q	S	D	E	K	L	F	R	L	I	K	P	Y	V	A	E	I	K	L	L	C	N	D	S	S	L	W	R	K	F	D	D	S	K	T	E	L	I	L	S	K	L	K	A	I	T	Q	F	A	E	D	L	R	L	L	K	E
Template Known Secondary structure											T	T	T
Template Predicted Secondary structure
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.																				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	G	Q	V	D	Y	S	K	I	M	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	S	A	E	I	E	R	F	S	A	M	F	Q	E	K	K	Q	E	V	Q	T	A	I	L	R	V	D
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	A	R	T	X	G	E	L	K	D	Y	V	N	N	N	D	D	I	T	S	L	L	L	A	N	K	D	K	S	D	A	E	L	Q	S	L	F	E	S	E	L	A	K	F	E	P	L	T	T	R	I	E	A	T	I	F	K	Q	G
Template Known Secondary structure															S	S	S				G	G	G			S	T	T			S	S	S	S	S	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	S	Q	Q	L	E	D	L	K	K	G	K	L	N	G	F	Q	S	Y	N	G	R	L	T	G	P	A	A	V	E	L	K	R	L	Y	Q	E	L	Q	I	R	N	Q	L	N	Q	E	Q	N	S	K	L	Q	Q	Q	K	E	L	L
Query Conservation
Alig confidence																							.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.
Template Sequence		S	T	I	N	G	V	K	I	E	L	D	N	I	F	G	L	T	G	I	Q	D	.	.	.	.	.	.	K	T	P	E	E	Q	K	A	E	L	E	R	K	L	F	F	D	K	L	E	E	A	T	T	K	F	T	I	F	S	S	D	I
Template Known Secondary structure																			S			S	.	.	.	.	.	.																	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		629	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.							650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	R	N	M	E	V	A	M	M	D	K	R	I	S	E	L	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	G	L	N	F	Y	N	S	L	L	K	X	S	K	D	L	Q	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		683	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D