Job Description Q62415 Confidence 48.96% Date Tue Jul 30 13:16:45 BST 2013 Rank 394 Aligned Residues 242 % Identity 7% Template c4hpqC_ PDB info PDB header:protein transport Chain: C: PDB Molecule:atg17; PDBTitle: crystal structure of the atg17-atg31-atg29 complex Resolution 3.06 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	G	C	H	L	A	E	V	W	R	G	S	E	R	P	I	P	Y	D	H	M	M	Y	E	H	L	Q	K	W	G	P	R	R	E	E	V	K	F	F	L	R	H	E	D	S	P	T	E	S	S	E	Q	G	A	R	Q	T	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	L	N	E	I	P	T	I	R	K	Q	V	E	N	I	T	R	Q	Y	Q	T	M	L	A	K	V	Q	S	Q	L	V	E	S	R	M	K	G	L	R	D	E	F	S	E	E	F	T	N	E	A	D	Q	L	E	Q	E	L	A	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	T	Q	R	S	V	V	N	V	P	G	E	K	R	T	E	N	G	V	G	N	P	R	V	E	L	T	L	S	E	L	Q	D	M	A	A	R	Q	Q	Q	Q	I	E	N	Q	Q	Q	M	L	V	A	K	E	Q	R	L	H	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	K	S	F	T	D	H	F	D	K	C	S	A	L	S	S	R	S	V	S	P	E	D	A	Q	N	L	F	E	I	V	E	R	D	D	K	D	L	A	A	I	N	S	L	L	Q	D	A	A	I	D	V	A	S	F	V	R	K	V
Template Known Secondary structure																T	T	T	T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		K	Q	Q	E	R	R	Q	Q	Q	S	V	S	E	N	E	.	K	L	Q	K	L	K	E	R	V	E	A	Q	E	N	K	L	K	K	I	R	A	M	R	G	Q	V	D	Y	S	K	I	M	N	G	N	L	S	A	E	I	E	R	F	S
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		N	M	L	L	D	E	R	D	A	D	K	A	K	M	Q	A	T	L	S	K	L	L	T	E	L	R	K	H	E	E	Y	I	S	V	F	E	G	I	S	A	L	I	Q	K	F	K	A	S	C	L	E	D	I	R	Q	T	R	N	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	F	Q	E	K	K	Q	E	V	Q	T	A	I	L	R	V	D	Q	L	S	Q	Q	L	E	D	L	K	K	G	K	L	N	G	F	Q	S	Y	N	G	R	L	T	G	P	A	A	V	E	L	K	R	L	Y	Q	E	L	Q	I	R
Query Conservation
Alig confidence																																										.	.	.	.	.
Template Conservation																																										.	.	.	.	.
Template Sequence		D	F	Y	A	N	F	E	R	S	Y	H	N	L	L	K	E	V	K	R	R	K	E	T	A	A	K	L	S	Q	I	L	K	S	C	E	T	Q	L	E	Q	.	.	.	.	.	I	N	T	A	D	L	R	E	R	Q	M	F	L	L	E
Template Known Secondary structure																																										.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.						.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		279	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	L	N	Q	E	Q	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	G	N	Y	L	P	E	T
Template Known Secondary structure		S	S	S	S	S		G	G
Template Predicted Secondary structure
Template SS confidence
		384	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D