Job Description Q62415 Confidence 95.60% Date Tue Jul 30 13:16:45 BST 2013 Rank 321 Aligned Residues 236 % Identity 13% Template c3vkgA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:dynein heavy chain, cytoplasmic; PDBTitle: x-ray structure of an mtbd truncation mutant of dynein motor domain Resolution 2.81 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		C	H	L	A	E	V	W	R	G	S	E	R	P	I	P	Y	D	H	M	M	Y	E	H	L	Q	K	W	G	P	R	R	E	E	V	K	F	F	L	R	H	E	D	.	.	.	.	.	.	S	P	T	E	S	S	E	Q	G	A	R	Q
Query Conservation																																												.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	I	Q	E	A	E	I	L	M	A	I	P	P	S	H	R	D	A	V	V	S	S	L	V	Y	I	H	Q	T	I	G	E	A	N	I	R	L	L	K	R	Q	G	R	Q	N	Y	V	T	P	R	H	Y	L	D	F	I	N	Q	V
Template Known Secondary structure													S	S																												S	S	S
Template Predicted Secondary structure
Template SS confidence
		3204	.	.	.	.	.	3210	.	.	.	.	.	.	.	.	.	3220	.	.	.	.	.	.	.	.	.	3230	.	.	.	.	.	.	.	.	.	3240	.	.	.	.	.	.	.	.	.	3250	.	.	.	.	.	.	.	.	.	3260	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	E	Q	R	T	Q	R	S	V	V	N	V	P	G	E	K	R	T	E	N	G	V	G	N	P	R	V	E	L	T	L	S	E	L	Q	D	M	A	A	R	Q	Q	Q	Q	I	E	N	Q	Q	Q	M	L	V	A	K	E	Q	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	L	I	N	E	K	R	D	Q	L	E	E	E	Q	L	H	L	N	I	G	L	K	K	L	R	D	T	E	A	Q	V	K	D	L	Q	V	S	L	A	Q	K	N	R	E	L	D	V	K	N	E	Q	A	N	Q	K	L	K	Q	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		3268	.	3270	.	.	.	.	.	.	.	.	.	3280	.	.	.	.	.	.	.	.	.	3290	.	.	.	.	.	.	.	.	.	3300	.	.	.	.	.	.	.	.	.	3310	.	.	.	.	.	.	.	.	.	3320	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.								190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.																.	.	.	.	.	.	.
Query SS confidence																				.																.	.	.	.	.	.	.
Query Sequence		H	F	L	K	Q	Q	E	R	R	Q	Q	Q	S	V	S	E	N	E	.	K	L	Q	K	L	K	E	R	V	E	A	Q	E	N	K	.	.	.	.	.	.	.	L	K	K	I	R	A	M	R	G	Q	V	D	Y	S	K	I	M	N	G
Query Conservation																				.																.	.	.	.	.	.	.
Alig confidence																				.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Q	D	Q	Q	A	A	E	I	K	Q	K	D	A	R	E	L	Q	V	Q	L	D	V	R	N	K	E	I	A	V	Q	K	V	K	A	Y	A	D	L	P	L	R	E	E	V	E	Q	L	E	N	A	A	N	E	L	K	L	K	Q	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		3328	.	3330	.	.	.	.	.	.	.	.	.	3340	.	.	.	.	.	.	.	.	.	3350	.	.	.	.	.	.	.	.	.	3360	.	.	.	.	.	.	.	.	.	3370	.	.	.	.	.	.	.	.	.	3380	.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	S	A	E	I	E	R	F	S	A	M	F	Q	E	K	K	Q	E	V	Q	T	A	I	L	R	V	D	Q	L	S	Q	Q	L	E	D	L	K	K	G	K	L	N	G	F	Q	S	Y	N	G	R	L	T	G	P	A	A	V	E	L
Query Conservation
Alig confidence																																																				.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		E	I	V	A	T	I	T	A	L	E	K	S	I	A	T	Y	K	E	E	Y	A	T	L	I	R	E	T	E	Q	I	K	T	E	S	S	K	V	K	N	K	V	D	R	S	I	A	L	L	D	N	.	.	.	.	.	L	N	S	E	R
Template Known Secondary structure																																																				.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		3517	.	.	3520	.	.	.	.	.	.	.	.	.	3530	.	.	.	.	.	.	.	.	.	3540	.	.	.	.	.	.	.	.	.	3550	.	.	.	.	.	.	.	.	.	3560	.	.	.	.	.	.						.	.	.	3570	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	L	Y	Q	E	L	Q	I	R	N	Q	L	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	W	E	Q	Q	S	E	N	F	N	T	Q	M	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		3572	.	.	.	.	.	.	.	3580	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D