Job Description Q62415 Confidence 99.15% Date Tue Jul 30 13:16:45 BST 2013 Rank 230 Aligned Residues 167 % Identity 22% Template c3ui2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle 43 kda protein, chloroplastic; PDBTitle: crystal structure of the cpsrp54 tail bound to cpsrp43 Resolution 3.18 Å

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		887	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	L	D	A	S	L	E	G	E	F	D	L	V	Q	R	I	I	Y	E	V	E	D	P	S	K	P	N	D	E	G	I	T	P	L	H	N	A	V	C	A	G	H	H	H	I	V	K	F	L	L	D	F	G	V	N	V	N	A
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		T	P	W	W	T	A	A	R	K	A	D	E	Q	A	L	S	Q	L	L	E	D	.	R	D	V	D	A	V	D	E	N	G	R	T	A	L	L	F	V	A	G	L	G	S	D	K	C	V	R	L	L	A	E	A	G	A	D	L	D	H
Template Known Secondary structure									T	T	T								T	T	T	T	.			T	T		B		T	T	S		B									T											T	T			T	T
Template Predicted Secondary structure																							.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		947		.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		A	.	D	S	D	G	W	T	P	L	H	C	A	A	S	C	N	S	V	H	L	C	K	Q	L	V	E	S	G	A	A	I	F	A	S	T	I	S	D	I	E	T	A	A	D	K	C	E	E	M	E	E	G	Y	I	Q	C	S	Q	F
Query Conservation			.
Alig confidence			.																																	.
Template Conservation																																				.
Template Sequence		R	D	M	R	G	G	L	T	A	L	H	M	A	A	G	Y	V	R	P	E	V	V	E	A	L	V	E	L	G	A	D	I	E	V	.	E	D	E	R	G	L	T	A	L	E	L	A	R	E	I	L	K	T	T	P	K	G	N	P	M
Template Known Secondary structure				S	S	S											T	T											T	T			T	T		.			T	T													T	T				S	S
Template Predicted Secondary structure																																				.
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		1006	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040				.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		L	Y	G	V	Q	E	K	L	G	V	M	N	K	G	T	V	Y	A	L	W	D	Y	E	A	Q	N	S	D	E	L	S	F	H	E	G	.	.	.	D	A	I	T	I	L	R	R	K	D	E	N	E	T	E	W	W
Query Conservation																																					.	.	.
Alig confidence																		.	.																		.	.	.
Template Conservation																		.	.
Template Sequence		Q	F	G	R	R	I	G	L	E	K	V	I	N	V	L	E	.	.	G	Q	V	F	E	Y	A	E	V	D	E	I	V	E	K	R	G	K	G	K	D	V	E	Y	L	V	R	W	K	D	G	G	D	C	E	W	V
Template Known Secondary structure																		.	.																	S		T	T	S								S	S	S	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D