Job Description Q62415 Confidence 37.62% Date Tue Jul 30 13:16:45 BST 2013 Rank 422 Aligned Residues 70 % Identity 13% Template c3tcaA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family b member PDBTitle: crystal structure of the ras-associating and pleckstrin-homology2 domains of riam Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.
Predicted Secondary structure															.	.																																								.	.
Query SS confidence															.	.																																								.	.
Query Sequence		M	M	P	M	I	L	T	V	F	L	S	N	N	.	.	E	Q	I	L	T	E	V	P	I	T	P	E	T	T	C	R	D	V	V	E	F	C	K	E	P	G	E	G	G	C	H	L	A	E	V	W	R	G	S	.	.	E	R	P	I
Query Conservation															.	.																																								.	.
Alig confidence															.	.																																								.	.
Template Conservation
Template Sequence		V	K	K	L	V	V	K	V	H	M	D	D	S	S	T	K	S	L	M	V	D	E	R	Q	L	A	R	D	V	L	D	N	L	F	E	K	T	H	C	D	C	N	V	D	W	C	L	Y	E	I	Y	P	E	L	Q	I	E	R	V	F
Template Known Secondary structure												T	T	S									T	T		B																		T	T								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	D	H	M	M	Y	E	H	L	Q	K	W	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	H	E	N	V	V	E	V	L	S	D	W	T
Template Known Secondary structure			T	T	S	B						T	T	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D