Return to main results Retrieve Phyre Job Id

Job DescriptionQ62415
Confidence99.16%DateTue Jul 30 13:16:45 BST 2013
Rank228Aligned Residues112
% Identity20%Templatec3keaB_
PDB info PDB header:viral proteinChain: B: PDB Molecule:k1l; PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   879880.........890.........900.........910.........920.........930........
Predicted Secondary structure 































Query SS confidence 



























































Query Sequence  LRVRFNPLALLLDASLEGEFDLVQRIIYEVEDPSKPNDEGITPLHNAVCAGHHHIVKFLL
Query Conservation        
   
  
   
    
                
 
 
  
   
    
  
 
Alig confidence 




































..




















Template Conservation     
  
 
 
  
    
   
  

  

  
   ..  


  
   
   

  

Template Sequence  FKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE. . NEFPLHQAATLEDTKIVKILL
Template Known Secondary structure  T


TTS

TT
TTGGGS

T..T

TTSSS
Template Predicted Secondary structure 



















..




Template SS confidence 



























































   24.....30.........40.........50.........60 .........70.........80.
 
   939940.........950.........960.........970.........980.........990..
Predicted Secondary structure 



































Query SS confidence 





















































Query Sequence  DFGVNVNAADSDGWTPLHCAASCNSVHLCKQLVESGAAIFASTISDIETAADKC
Query Conservation    
      
  
 



 

          
   
                  
Alig confidence 





















































Template Conservation                
 
  
        
  

  
  
           
  
Template Sequence  FSGLDDSQFDDKGNTALYYAVDSGNXQTVKLFVKKNWRLXFYGKTGWKTSFYHA
Template Known Secondary structure  TT

TT


TTS

T

GGGGG
SSSGGGS
Template Predicted Secondary structure 


























Template SS confidence 





















































   82.......90.........100.........110.........120.........130.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D