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Job DescriptionQ62415
Confidence75.55%DateTue Jul 30 13:16:45 BST 2013
Rank363Aligned Residues108
% Identity13%Templatec3ipkA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:agi/ii; PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   123......130.........140.........150.........160.........170.........180..
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Query Sequence  RVELTLSELQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSVSENEKLQKLKER
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Template Sequence  DYQAKLTAYQTELARVQKANADAKAAYEAAVAANNAANAALTAENTAIK. . . . . KRNADA
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   391........400.........410.........420.........430......... 440.....
 
   183......190.........200.........210.........220.........230.....
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Query Sequence  VEAQENKLKKIRAMRGQVDYSKIMNGNLSAEIERFSAMFQEKKQEVQTAILRV
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Template Conservation                                                       
Template Sequence  KADYEAKLAKYQADLAKYQKDLADYPVKLKAYEDEQTSIKAALAELEKHKNED
Template Known Secondary structure  GGGTTST
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   446...450.........460.........470.........480.........490........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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