Job Description Q62415 Confidence 33.02% Date Tue Jul 30 13:16:45 BST 2013 Rank 443 Aligned Residues 233 % Identity 11% Template c3i2wB_ PDB info PDB header:endocytosis Chain: B: PDB Molecule:syndapin; PDBTitle: crystal structure of efc/f-bar domain of drosophila2 syndapin/pacsin Resolution 2.67 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		T	C	R	D	V	V	E	F	C	K	E	P	G	E	G	G	.	.	.	.	C	H	L	A	E	V	W	R	G	S	E	R	P	I	P	Y	D	H	M	M	Y	E	H	L	Q	K	W	G	P	R	R	E	E	V	K	F	F	L	R	H
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.																																				.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		L	C	N	D	L	Q	Q	L	I	Q	E	R	A	D	I	E	K	G	Y	A	K	S	L	R	T	W	S	K	K	W	G	E	L	I	E	K	G	P	E	Y	G	T	T	E	A	A	W	K	G	V	L	T	E	S	E	.	.	.	.	.
Template Known Secondary structure																																						S	S																		.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	S	P	T	E	S	S	E	Q	G	A	R	Q	T	Q	E	Q	R	T	Q	R	S	V	V	N	V	P	G	E	K	R	T	E	N	G	V	G	N	P	R	V	E	L	T	L	S	E	L	Q	D	M	A	A	R	Q	Q	Q	Q	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	R	I	S	D	V	H	X	K	I	K	D	N	L	C	N	D	V	N	S	Q	I	K	T	W	Q	K	E	N	Y	H	H	T	L	X	Q	I	K	E	R	K	D	L	E	D	L	F	K	K	A	Q	K	P	W
Template Known Secondary structure		.	.	.	.	.	.	.																T																	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	Q	Q	Q	M	L	V	A	K	E	Q	R	L	H	F	L	K	Q	Q	E	R	R	Q	Q	Q	S	V	S	E	N	E	K	L	Q	K	L	K	E	R	V	E	A	Q	E	N	K	L	K	K	I	R	A	M	R	G	Q	V	D	Y
Query Conservation
Alig confidence																																						.	.	.	.	.
Template Conservation																																						.	.	.	.	.
Template Sequence		A	K	L	L	A	K	V	E	K	A	K	A	D	Y	H	S	A	C	K	T	E	R	S	A	T	N	Q	E	R	N	A	N	A	D	S	S	.	.	.	.	.	L	S	P	D	Q	V	K	K	X	H	D	R	V	Q	K	T	K	D	Q
Template Known Secondary structure																															T	T	T	T		T	T	.	.	.	.	.	S
Template Predicted Secondary structure																																						.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		S	K	I	M	N	G	N	L	S	A	E	I	E	R	F	S	A	M	F	Q	E	K	K	Q	E	V	Q	T	A	I	L	R	V	D	Q	L	S	Q	Q	.	L	E	D	L	K	K	G	K	L	N	G	F	Q	S	Y	N	G	R	L	T
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		V	Q	K	C	R	E	K	Y	E	Q	A	I	A	E	I	T	K	Y	N	S	V	Y	I	E	D	X	T	S	V	F	E	K	C	Q	T	F	E	K	T	R	L	Q	F	F	K	E	I	L	F	N	V	H	S	C	L	D	L	T	K	V
Template Known Secondary structure																																																										G	G	G
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	A	A	V	E	L	K	R	L	Y	Q	E	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	L	P	Q	I	Y	E	E	F	S	H	T	I	N
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D