Job Description Q62415 Confidence 31.40% Date Tue Jul 30 13:16:45 BST 2013 Rank 450 Aligned Residues 194 % Identity 12% Template c3fb2B_ PDB info PDB header:structural protein Chain: B: PDB Molecule:spectrin alpha chain, brain spectrin; PDBTitle: crystal structure of the human brain alpha spectrin repeats2 15 and 16. northeast structural genomics consortium target3 hr5563a. Resolution 2.30 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	Q	K	W	G	P	R	R	E	E	V	K	F	F	L	R	H	E	D	S	P	T	E	S	S	E	Q	G	A	R	Q	T	Q	E	Q	R	T	Q	R	S	V	V	N	V	P	G	E	K	R	T	E	N	G	V	G	N	P	R	V
Query Conservation
Alig confidence																																.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		D	L	Q	R	F	L	S	D	F	R	D	L	X	S	W	I	N	G	I	R	G	L	V	S	S	D	E	L	A	K	.	.	.	.	D	V	T	G	A	E	A	L	L	E	R	H	Q	E	H	R	T	E	I	D	A	R	A	G	T	F
Template Known Secondary structure																									T						S	.	.	.	.	S																					T
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.					1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	T	L	S	E	L	Q	D	M	A	A	R	Q	Q	Q	Q	I	E	N	Q	Q	Q	M	L	V	A	K	E	Q	R	L	H	F	L	K	Q	Q	E	R	R	Q	Q	Q	S	V	S	E	N	E	K	L	Q	K	L	K	E	R	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	F	E	Q	F	G	Q	Q	L	L	A	H	G	H	Y	A	S	P	E	I	K	Q	K	L	D	I	L	D	Q	E	R	A	D	L	E	K	A	W	V	Q	R	R	X	X	L	D	Q	C	L	E	L	Q	L	F	H	R	D	C	E
Template Known Secondary structure														T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		1396	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	E	N	K	L	K	K	I	R	A	M	R	G	Q	V	D	Y	S	K	I	M	N	G	N	L	S	A	E	I	E	R	F	S	A	M	F	Q	E	K	K	Q	E	V	Q	T	A	I	L	R	V	D	Q	L	S	Q	Q	L	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	E	N	W	X	A	A	R	E	A	F	L	D	S	V	E	A	L	I	K	K	H	E	D	F	D	K	A	I	N	V	Q	E	E	K	I	A	A	L	Q	A	F	A	D	Q	L	I	A	A	G	H	Y	A	K	G	D	I	S	S
Template Known Secondary structure												T	T																																						T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		1456	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	K	G	K	L	N	G	F	Q	S	Y	N	G	R	L	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	N	E	V	L	D	R	W	R	R	L	K	A	Q	X	I	E
Template Known Secondary structure																			T
Template Predicted Secondary structure
Template SS confidence
		1525	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D